Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A17
         (184 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ...    27   1.8  
U41552-8|AAC69099.2|  771|Caenorhabditis elegans Hypothetical pr...    25   7.1  
Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z81528-7|CAB04286.1|  259|Caenorhabditis elegans Hypothetical pr...    25   9.4  

>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
           protein Y37B11A.2 protein.
          Length = 1133

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 100 KKLDRIYNRKQIKLKLVSNNDY 165
           KKL RI + +Q+ LKLV+N  Y
Sbjct: 743 KKLKRILDARQLALKLVANVSY 764


>U41552-8|AAC69099.2|  771|Caenorhabditis elegans Hypothetical
           protein K07E3.2 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 85  IHKLLKKLDRIYNRKQIKLKLVSNNDYRSE 174
           ++K LKKLD I+    + L + +  D+R E
Sbjct: 609 VYKKLKKLDAIFYPVVLDLPVAAFKDFREE 638


>Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical
           protein T02G6.6 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 8/19 (42%), Positives = 16/19 (84%)
 Frame = +1

Query: 103 KLDRIYNRKQIKLKLVSNN 159
           K+D +Y+RKQI+L +++ +
Sbjct: 252 KIDNVYHRKQIQLPVLTQS 270


>Z81528-7|CAB04286.1|  259|Caenorhabditis elegans Hypothetical
           protein F35E2.8 protein.
          Length = 259

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 89  WILDITSKHKALPSNYQLLLQC 24
           +I+ + S H+  PSN  LLL C
Sbjct: 151 FIVKLNSFHELTPSNSNLLLDC 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,065,642
Number of Sequences: 27780
Number of extensions: 36292
Number of successful extensions: 101
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 12,740,198
effective HSP length: 41
effective length of database: 11,601,218
effective search space used: 220423142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)