BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A17
(184 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 0.25
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 0.34
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 0.34
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 0.59
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 0.59
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 2.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 19 4.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 19 4.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 19 4.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 19 4.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 19 4.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 19 4.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 19 4.1
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 19 7.2
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 18 9.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 18 9.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 18 9.5
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 0.25
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ HK++ L YN K + N+YR Y
Sbjct: 76 SKEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYY 109
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 0.34
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 100 KKLDRIYNRKQIKLKLVSNND 162
KKL+ YN +K +SNN+
Sbjct: 525 KKLNMFYNNFNSDIKSISNNE 545
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 0.34
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 100 KKLDRIYNRKQIKLKLVSNND 162
KKL+ YN +K +SNN+
Sbjct: 525 KKLNMFYNNFNSDIKSISNNE 545
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 0.59
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ HK++ L YN K + N+Y+ Y
Sbjct: 76 SKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYY 109
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 0.59
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ HK++ L YN K + N+Y+ Y
Sbjct: 76 SKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYY 109
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 5 NWFSERDIEVK 37
NW +++DI+VK
Sbjct: 608 NWRNQKDIDVK 618
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ K++ L YN +NN+Y+ CY
Sbjct: 76 SKEPKIISSLSNNYNYSNY-----NNNNYKQLCY 104
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ K++ L YN +NN+Y+ CY
Sbjct: 76 SKEPKIISSLSNNYNYSNY-----NNNNYKQLCY 104
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ K++ L YN +NN+Y+ CY
Sbjct: 76 SKEPKIISSLSNNYNYSNY-----NNNNYKQLCY 104
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ K++ L YN +NN+Y+ CY
Sbjct: 76 SKEPKIISSLSNNYNYSNY-----NNNNYKQLCY 104
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ K++ L YN +NN+Y+ CY
Sbjct: 76 SKEPKIISSLSNNYNYSNY-----NNNNYKQLCY 104
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 79 SRIHKLLKKLDRIYNRKQIKLKLVSNNDYRSECY 180
S+ K++ L YN +NN+Y+ CY
Sbjct: 76 SKEPKIISSLSNNYNYSNY-----NNNNYKQLCY 104
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 101 FNNLWILDITSKHKALP 51
F+ LW+LD ++ +P
Sbjct: 133 FDRLWVLDSGLVNRTVP 149
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 101 FNNLWILD 78
F+ LWILD
Sbjct: 136 FDRLWILD 143
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -3
Query: 101 FNNLWILD 78
F+ LW+LD
Sbjct: 138 FDRLWVLD 145
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +1
Query: 160 DYRSECYF 183
DY +CYF
Sbjct: 82 DYSMDCYF 89
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -3
Query: 101 FNNLWILD 78
F+ LW+LD
Sbjct: 136 FDRLWVLD 143
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,801
Number of Sequences: 438
Number of extensions: 438
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used: 2576460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -