Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A16
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   4.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   5.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      20   9.5  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -3

Query: 240 VELMTIAQSTRVVHGQHITIFRLRSTSFGHAQDINLKFGNLRICDRSSNKGQHHK 76
           V L+   QS  + H  H+  +       G + D N+K  NL+       +G  H+
Sbjct: 582 VVLVDEVQSPNLSHPFHLHGYAFNVVGIGRSPDQNVKKINLKHALDLDRRGLLHR 636


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 163 CTTKSKDGDMLTMHY 207
           CT K K+G    +HY
Sbjct: 78  CTEKQKEGSRKIIHY 92


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 158 SGTLKTSILSSVTSESAIVAPTRANITKTQRNI 60
           S  +KT+     TSE   +   + N  KTQ N+
Sbjct: 162 SERMKTTRALEKTSEELKIPKAKINTGKTQYNL 194


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 292 VIKGWDQGLRDMCVG 336
           V K WD GLR   VG
Sbjct: 268 VAKLWDSGLRKPGVG 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,840
Number of Sequences: 336
Number of extensions: 1832
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)