Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A16
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.3  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               21   8.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 361  SSLGYGNRGAGNVIPPHATLH 423
            S+ G  +RG  + I P+AT H
Sbjct: 1709 SAEGLSHRGMEDEICPYATFH 1729


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +1

Query: 55 VMMLRCVFVMLALV 96
          + MLRC+++ L+++
Sbjct: 2  ISMLRCIYLFLSVI 15


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 312 LIPAFDDLTDAELKGEWLIAIK 247
           L P   DLT      EWL +IK
Sbjct: 914 LAPDAVDLTQLTSVSEWLASIK 935


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,805
Number of Sequences: 438
Number of extensions: 2359
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)