Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A15
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 31 0.35
AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical ... 29 1.4
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 29 1.9
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z50863-2|CAA90737.1| 351|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z82051-3|CAB04817.1| 337|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 27 10.0
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 27 10.0
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 27 10.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 10.0
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = +3
Query: 207 NRDPC-RYIRGAWSECDSKTN--IKSRKLTL-----KKGDPANCDTVKTVQKKCKKACR- 359
NR PC R++ G WSEC + +K R ++ + C +T + + AC
Sbjct: 1072 NRIPCPRWVYGHWSECSRSCDGGVKMRHAQCLDAADRETHTSRCGPAQTQEHCNEHACTW 1131
Query: 360 YEKSAWSECNA 392
++ WS+C+A
Sbjct: 1132 WQFGVWSDCSA 1142
Score = 26.6 bits (56), Expect = 10.0
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Frame = +3
Query: 237 AWSECDSKTNIKSRKLTLKKGDPA--------NCD-TVKTVQK-KCK-KAC-RYEKSAWS 380
AWS C +K +++ ++ +P+ CD T K V++ +C+ K C R++ + WS
Sbjct: 1644 AWSACSAKCGRGTKRRVVECVNPSLNVTVASTECDQTKKPVEEVRCRTKHCPRWKTTTWS 1703
Query: 381 ECNAN-GEMTRTDTLKAN-------SDSSCEPSRRATKKCN 479
C+ G R ++ SDS C P + N
Sbjct: 1704 SCSVTCGRGIRRREVQCYRGRKNLVSDSECNPKTKLNSVAN 1744
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = +3
Query: 207 NRDPC-RYIRGAWSECDSKTN--IKSRKLTL-----KKGDPANCDTVKTVQKKCKKACR- 359
NR PC R++ G WSEC + +K R ++ + C +T + + AC
Sbjct: 1072 NRIPCPRWVYGHWSECSRSCDGGVKMRHAQCLDAADRETHTSRCGPAQTQEHCNEHACTW 1131
Query: 360 YEKSAWSECNA 392
++ WS+C+A
Sbjct: 1132 WQFGVWSDCSA 1142
Score = 26.6 bits (56), Expect = 10.0
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Frame = +3
Query: 237 AWSECDSKTNIKSRKLTLKKGDPA--------NCD-TVKTVQK-KCK-KAC-RYEKSAWS 380
AWS C +K +++ ++ +P+ CD T K V++ +C+ K C R++ + WS
Sbjct: 1644 AWSACSAKCGRGTKRRVVECVNPSLNVTVASTECDQTKKPVEEVRCRTKHCPRWKTTTWS 1703
Query: 381 ECNAN-GEMTRTDTLKAN-------SDSSCEPSRRATKKCN 479
C+ G R ++ SDS C P + N
Sbjct: 1704 SCSVTCGRGIRRREVQCYRGRKNLVSDSECNPKTKLNSVAN 1744
>AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical
protein ZC190.8 protein.
Length = 227
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 258 KTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYE-KSAWSECNANGEMTRTDTLKANS 434
K+N KS + + G P N T +K KK+ R + K ++ N E T T K
Sbjct: 158 KSNRKSTDSSTELGSPTNSQYSTTTRKSSKKSTRSDRKMEKTQRNEKSEHTEEQTDKTEK 217
Query: 435 DSSCEPSRR 461
SR+
Sbjct: 218 TVKSTASRK 226
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 342 CKKACRYEKSAWSECNANGEMTRTDTLKANSDSSCEPS--RRATKKCN 479
C A R + SEC + E T+T + +SC P+ + ++CN
Sbjct: 29 CYPANRTSATTCSECTCSDESTQTSDTTCTAPTSCSPNPCTLSNQQCN 76
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 91 CCGLWQGFCCCRSHWC 138
CCG G CCCR C
Sbjct: 79 CCGCGCGCCCCRPRCC 94
>Z50863-2|CAA90737.1| 351|Caenorhabditis elegans Hypothetical
protein C14H10.4 protein.
Length = 351
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -3
Query: 496 FTCLFLLHFFVARLLGSQEESLLAFKVSVLVISPLALHSLQADFS*RQAFLHFFCTVFTV 317
F ++L FFV L+G+ ++ +L F + ++ S + + + + + + F +T
Sbjct: 23 FFVIYLTTFFVKNLIGTYKKMILIFSLLGILFSGIEILARPFAHNYNNSLMFFSLNFWTS 82
Query: 316 SQLAGSPFLRV 284
SQ F+ V
Sbjct: 83 SQTLPEFFISV 93
>Z82051-3|CAB04817.1| 337|Caenorhabditis elegans Hypothetical
protein T23D5.6 protein.
Length = 337
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 496 FTCLFLLHFFVARLLGSQEESLLAFKVSVLVISPL 392
FT +FL FFV + LG+ + +L F + + + L
Sbjct: 24 FTLIFLTPFFVRKDLGAYKHLILLFSILGIAFASL 58
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 26.6 bits (56), Expect = 10.0
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
Frame = +3
Query: 222 RYIRGAWSECDSKT----NIKSRKLTLK---KGDPAN-----CDTVKTVQKKCKKAC--- 356
R+ G WSEC KT ++R ++ K G+ N C+++ +V+ + C
Sbjct: 477 RWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETRPCHRE 536
Query: 357 ---RYEKSAWSECNA 392
R+E S WSEC++
Sbjct: 537 DCPRWEASQWSECSS 551
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical protein
F53B6.2a protein.
Length = 1045
Score = 26.6 bits (56), Expect = 10.0
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
Frame = +3
Query: 222 RYIRGAWSECDSKT----NIKSRKLTLK---KGDPAN-----CDTVKTVQKKCKKAC--- 356
R+ G WSEC KT ++R ++ K G+ N C+++ +V+ + C
Sbjct: 811 RWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETRPCHRE 870
Query: 357 ---RYEKSAWSECNA 392
R+E S WSEC++
Sbjct: 871 DCPRWEASQWSECSS 885
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 26.6 bits (56), Expect = 10.0
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 246 ECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA---CRYE---KSAWSECNANGEMT 407
EC + + +T G+ + + KT +K+C K C + S W EC+ + +
Sbjct: 3068 ECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSNQHCIHSTW-ECDGDNDCL 3126
Query: 408 RTDTLKAN-SDSSCEPS--RRATKKCNKN 485
AN + SSC+P + A KC N
Sbjct: 3127 DGSDEHANCTYSSCQPDFFQCANHKCVPN 3155
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 26.6 bits (56), Expect = 10.0
Identities = 23/102 (22%), Positives = 34/102 (33%)
Frame = +3
Query: 186 RSVRGAKNRDPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYE 365
R + K +D C S C +T+ + + G K+ ++K K A R
Sbjct: 773 RKSKSEKKKDSCERSSAETSSCTEQTSSPMSEASSSDGRKKPKKAGKSAERKEKSAERNP 832
Query: 366 KSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNKQ 491
S + A M + SD RA K KQ
Sbjct: 833 SSEKDDDGATEAMIGVERRSTPSDVVKNKKGRAKGDPEKQKQ 874
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
C28A5.6 protein.
Length = 1061
Score = 26.6 bits (56), Expect = 10.0
Identities = 23/102 (22%), Positives = 34/102 (33%)
Frame = +3
Query: 186 RSVRGAKNRDPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYE 365
R + K +D C S C +T+ + + G K+ ++K K A R
Sbjct: 773 RKSKSEKKKDSCERSSAETSSCTEQTSSPMSEASSSDGRKKPKKAGKSAERKEKSAERNP 832
Query: 366 KSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNKQ 491
S + A M + SD RA K KQ
Sbjct: 833 SSEKDDDGATEAMIGVERRSTPSDVVKNKKGRAKGDPEKQKQ 874
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 26.6 bits (56), Expect = 10.0
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +3
Query: 273 SRKLTLKKGDPANCDTVKTVQKKCK---KACRYEKSAWSECNANGEMTRT-DTLKANSDS 440
SR +++ + A+ + V++K + + R + + E ++ G + R+ D +A S
Sbjct: 535 SRSISINEDPAASHYYGQRVERKKRLGGELARRQGRVYEEVSSPGPLKRSADQSRAGSIQ 594
Query: 441 SCE-PSRRATKKCNKNKQV 494
E PSR+ ++ NKN QV
Sbjct: 595 PAEGPSRKQRRRNNKNVQV 613
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 26.6 bits (56), Expect = 10.0
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 246 ECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA---CRYE---KSAWSECNANGEMT 407
EC + + +T G+ + + KT +K+C K C + S W EC+ + +
Sbjct: 3068 ECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSNQHCIHSTW-ECDGDNDCL 3126
Query: 408 RTDTLKAN-SDSSCEPS--RRATKKCNKN 485
AN + SSC+P + A KC N
Sbjct: 3127 DGSDEHANCTYSSCQPDFFQCANHKCVPN 3155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,344,416
Number of Sequences: 27780
Number of extensions: 181384
Number of successful extensions: 509
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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