Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A12
         (470 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013947-1|AAH13947.2|  640|Homo sapiens KIAA0841 protein protein.     31   1.5  
AB020648-1|BAA74864.1|  641|Homo sapiens KIAA0841 protein protein.     31   1.5  
AF054589-1|AAF36999.1|  355|Homo sapiens HIC protein isoform p40...    31   2.0  
AK023936-1|BAB14733.1|  181|Homo sapiens protein ( Homo sapiens ...    29   8.1  
AF103685-1|AAD16745.1|  110|Homo sapiens immunoglobulin lambda l...    29   8.1  

>BC013947-1|AAH13947.2|  640|Homo sapiens KIAA0841 protein protein.
          Length = 640

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 115 QPLPSTMPIYHRLRNSSAR-SGYHKPNMPLGKKPFTIQDLLVQRLKCLRQ--LICSSQRQ 285
           +PLP+ +P  H+L  +S R S +   +  LG  P    +LL+     LRQ  L+   QR 
Sbjct: 478 KPLPTVLPSIHQLHPASPRGSSFIALSHKLGLPPGKASELLLPAAASLRQDLLLLQDQRS 537

Query: 286 L 288
           L
Sbjct: 538 L 538


>AB020648-1|BAA74864.1|  641|Homo sapiens KIAA0841 protein protein.
          Length = 641

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 115 QPLPSTMPIYHRLRNSSAR-SGYHKPNMPLGKKPFTIQDLLVQRLKCLRQ--LICSSQRQ 285
           +PLP+ +P  H+L  +S R S +   +  LG  P    +LL+     LRQ  L+   QR 
Sbjct: 479 KPLPTVLPSIHQLHPASPRGSSFIALSHKLGLPPGKASELLLPAAASLRQDLLLLQDQRS 538

Query: 286 L 288
           L
Sbjct: 539 L 539


>AF054589-1|AAF36999.1|  355|Homo sapiens HIC protein isoform p40
           protein.
          Length = 355

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -1

Query: 179 YPERADEFRRRW*IGIVEGNGCYRGISAIHQLQIMRNAVQPSFRCGQRKVRRGIHSFRR 3
           +P R    RRR  +G   G GC   +S++H      ++V+P+ R  +R+ RRG  S  R
Sbjct: 52  FPGRKRRRRRRKGLGATTG-GCGEAVSSLHPAPHSPSSVRPAGRRARRQ-RRGAGSAER 108


>AK023936-1|BAB14733.1|  181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13874 fis, clone THYRO1001365. ).
          Length = 181

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -2

Query: 178 IQSVQMNSAGDGKSASLRVTVATAEYLPSTSFKLCETPSSRLSGVASVRLGA 23
           ++S ++ + G+G   S  VTVA   YLP +   +  +  + L+ V + R GA
Sbjct: 73  VESGRVEAGGEGLKMSRVVTVAPPRYLPHSLASMGGSKEAPLARVGAGRQGA 124


>AF103685-1|AAD16745.1|  110|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 110

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 20/79 (25%), Positives = 33/79 (41%)
 Frame = +3

Query: 24  APNLTLATPERRLDGVSHNLKLVDGRYSAVATVTLNDADLPSPAEFICTLWIPQAKYAVR 203
           AP L L   + R  G+   ++         AT+T+N  +    A++ C LW     +   
Sbjct: 38  APVLLLFDDDDRPSGIP--VRFSGSNSGDTATLTINRVEAGDEADYYCQLW-----HIES 90

Query: 204 KEAIYYPGPISTTPEMPTA 260
            + ++ PG   T P  P A
Sbjct: 91  DQYVFGPGTKVTVPGQPKA 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,361,862
Number of Sequences: 237096
Number of extensions: 1583431
Number of successful extensions: 3152
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3152
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)