Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A11
         (327 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   3.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   5.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   5.7  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 152 RLGRVSSASVRLAVKVFGEPLELGFINRRVSGH 54
           R+G +S    +   +V  +PL +G   + VS H
Sbjct: 12  RIGIISGGRGQNTQRVQNQPLVIGCDEKHVSPH 44


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 49  PEWPETLLLMNPNSR 93
           P+W  T L  +PN R
Sbjct: 172 PDWEGTTLSQSPNRR 186


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 259 SNHDTKNDHKKKFI 218
           SNH  KN H K+ I
Sbjct: 564 SNHMVKNSHYKEHI 577


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 132 RANTAKATYAVCGALILYFTL 194
           R+N  K T  +CG +  Y  +
Sbjct: 308 RSNDPKVTLELCGMISTYLII 328


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
          factor protein.
          Length = 441

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 5/12 (41%), Positives = 12/12 (100%)
 Frame = +2

Query: 35 KLLISQNGRRLF 70
          ++++++NGRR+F
Sbjct: 47 EMIVTKNGRRMF 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,767
Number of Sequences: 336
Number of extensions: 1140
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)