Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A11
         (327 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC091507-1|AAH91507.1|   58|Homo sapiens USMG5 protein protein.        54   1e-07
BC072683-1|AAH72683.1|   58|Homo sapiens USMG5 protein protein.        54   1e-07
BC007087-1|AAH07087.1|   58|Homo sapiens upregulated during skel...    54   1e-07
AY740522-1|AAU89079.1|   58|Homo sapiens HCV F-transactivated pr...    54   1e-07
AL591408-5|CAI16748.1|   58|Homo sapiens novel protein protein.        54   1e-07
AJ272056-1|CAC81243.1|   58|Homo sapiens hypothetical protein pr...    54   1e-07
Z83843-1|CAI42707.1|   58|Homo sapiens upregulated during skelet...    52   4e-07
DQ217943-1|ABB70740.1| 1095|Homo sapiens ADAM metallopeptidase w...    31   1.1  
AJ315735-1|CAC86016.1| 1095|Homo sapiens metalloprotease disinte...    31   1.1  
AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 pro...    28   5.8  

>BC091507-1|AAH91507.1|   58|Homo sapiens USMG5 protein protein.
          Length = 58

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N   ATY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKLRSKKT 52


>BC072683-1|AAH72683.1|   58|Homo sapiens USMG5 protein protein.
          Length = 58

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N   ATY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKLRSKKT 52


>BC007087-1|AAH07087.1|   58|Homo sapiens upregulated during
           skeletal muscle growth 5 homolog (mouse) protein.
          Length = 58

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N   ATY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKLRSKKT 52


>AY740522-1|AAU89079.1|   58|Homo sapiens HCV F-transactivated
           protein 2 protein.
          Length = 58

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N   ATY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKLRSKKT 52


>AL591408-5|CAI16748.1|   58|Homo sapiens novel protein protein.
          Length = 58

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N   ATY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKLRSKKT 52


>AJ272056-1|CAC81243.1|   58|Homo sapiens hypothetical protein
           protein.
          Length = 58

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N   ATY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLATYGSIALIVLYFKLRSKKT 52


>Z83843-1|CAI42707.1|   58|Homo sapiens upregulated during skeletal
           muscle growth 5 homolog (mouse) pseudogene 1 protein.
          Length = 58

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 25/52 (48%), Positives = 30/52 (57%)
 Frame = +3

Query: 54  MAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRPKKS 209
           MAG  S  + QF G+ KYFNS T  GR N    TY     ++LYF LR KK+
Sbjct: 1   MAGPESDAQYQFTGIKKYFNSYTLTGRMNCVLVTYRSIALIVLYFKLRSKKT 52


>DQ217943-1|ABB70740.1| 1095|Homo sapiens ADAM metallopeptidase with
           thrombospondin type 1 motif 17 protein.
          Length = 1095

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 101 GEPLELGFINRRVSGHSGKLIILALC 24
           G P EL F + RV GH G L+ L+ C
Sbjct: 119 GRPAELCFYSGRVLGHPGSLVSLSAC 144


>AJ315735-1|CAC86016.1| 1095|Homo sapiens metalloprotease
           disintegrin 17, with thrombospondin domains protein.
          Length = 1095

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 101 GEPLELGFINRRVSGHSGKLIILALC 24
           G P EL F + RV GH G L+ L+ C
Sbjct: 119 GRPAELCFYSGRVLGHPGSLVSLSAC 144


>AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2
           protein.
          Length = 4349

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 45  FPRMAGDSSVDESQFKGLSKYFNSQTNRGRANTAKATYAVCGALILYFTLRP 200
           F R + D ++DE+   G S    + T+R        TY++ G   L F++ P
Sbjct: 458 FNRSSYDGTLDENIPPGTSVLAVTATDRDHGENGYVTYSIAGPKALPFSIDP 509


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,631,295
Number of Sequences: 237096
Number of extensions: 672003
Number of successful extensions: 1179
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)