Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A11
         (327 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    29   0.79 
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    29   0.79 
U46668-5|AAA93349.2|  569|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AF077533-2|AAP40529.1|  972|Caenorhabditis elegans Hypothetical ...    26   5.6  
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ...    26   5.6  
Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical pr...    26   7.4  

>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +1

Query: 22  LHKAKIINFPEWPETLLLMNPNS----RGSPNTLTAKRTEAELTRPRRPMQSAV 171
           LH + I+  P   + +   NP S    RG+P   T +R  + +TR R   QS++
Sbjct: 317 LHVSHIVGNPGVADVVQAHNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSSI 370


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = +1

Query: 22  LHKAKIINFPEWPETLLLMNPNS----RGSPNTLTAKRTEAELTRPRRPMQSAV 171
           LH + I+  P   + +   NP S    RG+P   T +R  + +TR R   QS++
Sbjct: 317 LHVSHIVGNPGVADVVQAHNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSSI 370


>U46668-5|AAA93349.2|  569|Caenorhabditis elegans Hypothetical
           protein F38E9.1 protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 40  INFPEWPETLL---LMNPNSRGSPNTLTAKRTEAELTRPRRP 156
           +N  E+PE  L    +NP     P  L  K  +AE+T P  P
Sbjct: 316 LNINEYPEHKLDSYSVNPYLENKPRALKTKNWDAEITYPTPP 357


>AF077533-2|AAP40529.1|  972|Caenorhabditis elegans Hypothetical
           protein F54G2.1b protein.
          Length = 972

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 87  FKGLSKYFNSQTNRGRANTAKATYAVCGAL 176
           FKG+ +YF   T   RAN+   T    G +
Sbjct: 267 FKGIGRYFKEVTQSARANSDDCTDDFLGCI 296


>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
           protein F54G2.1a protein.
          Length = 1126

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 87  FKGLSKYFNSQTNRGRANTAKATYAVCGAL 176
           FKG+ +YF   T   RAN+   T    G +
Sbjct: 251 FKGIGRYFKEVTQSARANSDDCTDDFLGCI 280


>Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical
           protein R07E5.1 protein.
          Length = 812

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -2

Query: 200 WSKSEIQDQCTADCIGRLGRVSSASVRLAVKVFGEPLELGFINRRVSGHSGKL 42
           W K E + + T+D  G L  V S +  LA      P+     ++ V    G L
Sbjct: 449 WEKKEFESKLTSDERGMLPEVQSRAQPLAKTAIAAPIHEMMASKFVKEAGGDL 501


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,621,725
Number of Sequences: 27780
Number of extensions: 107940
Number of successful extensions: 242
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)