Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A11
         (327 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   6.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   8.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    20   8.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 48   PRMAGDSSVDESQFKGLS 101
            PR+A DSS DES ++G S
Sbjct: 1342 PRLAQDSSEDES-YRGPS 1358


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
          receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 45 FPRMAGDSSVDESQFKG 95
          F R  GD S+DE ++ G
Sbjct: 17 FARPGGDYSLDEIEWDG 33


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 194 KSEIQDQCTADCIGRLGRVSSASVRLAVKVFG 99
           KS I       CI R+ R +  +  LAV V G
Sbjct: 283 KSGIVRSHQQSCINRVARETKTAGTLAVVVGG 314


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 52  EWPETLLLMNPNSRGSPNTL 111
           EW +  L  NP+  G  +TL
Sbjct: 76  EWNDYKLKWNPDDYGGVDTL 95


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 KRTEAELTRPRRPMQSAV 171
           K T  ELT    P+QSA+
Sbjct: 795 KYTGCELTSESMPLQSAL 812


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 KRTEAELTRPRRPMQSAV 171
           K T  ELT    P+QSA+
Sbjct: 885 KYTGCELTSESMPLQSAL 902


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,512
Number of Sequences: 438
Number of extensions: 1250
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)