Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A08
(574 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.37
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 29 0.37
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.48
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 29 0.64
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 29 0.64
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.64
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.64
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.1
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 27 2.6
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 26 4.5
SPAC11D3.10 |||nifs homolog|Schizosaccharomyces pombe|chr 1|||Ma... 26 4.5
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.9
SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomy... 25 7.9
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.37
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 469 LFISNFGISNFTFLLVGLSLNTSSRRPFSPALSN--TDDKPSSLSGSRTNIRKPDSLYGN 296
++++ G+ T +S TSS SP+ S+ T PSS S S ++ S +
Sbjct: 115 VYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSS 174
Query: 295 STSCASSS 272
S+S +SSS
Sbjct: 175 SSSSSSSS 182
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 29.5 bits (63), Expect = 0.37
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 415 SLNTSSRRPFSPALSNTDDKPSSLS-GSRTNIRKPDSLYGNSTSCASSSLFS 263
++NTS R FSP L+ T SL G+ T+++ P SL + +S ++S
Sbjct: 320 TINTSFDRKFSPKLTRTPSLTKSLDPGTPTSLKSP-SLRKSPSSFVQKDVYS 370
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.48
Identities = 39/161 (24%), Positives = 63/161 (39%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
S + T S T A S ++ + L S+ + S+ S+ T + S TSS
Sbjct: 101 SASPTSSSLTSSSATSSSLASSSTTS-SSLASSSITSSSLASSSITSSSLASSSTTSSSL 159
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S S T P+S + S + S S+S ASSSL S + +
Sbjct: 160 ASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNS--TTSATATSSSLSSTA 217
Query: 211 VESTWKSFSLVSLALKGTCQ*PWKNITLKSAAAAFGSMVSS 89
++ S SL S +L T + ++ S ++ + SS
Sbjct: 218 ASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSS 258
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 409 NTSSRRPFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFS 263
+T+S P S +L+++ SSL+ S T S S+S ASSS+ S
Sbjct: 98 STTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITS 146
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 28.7 bits (61), Expect = 0.64
Identities = 12/43 (27%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 427 LVGLSLNTSSRRPFSPALSNTDDKPSSLS-GSRTNIRKPDSLY 302
L+G S+NTSS + + L++T + +S++ +R +++ D+++
Sbjct: 526 LIGSSINTSSHQHYGSTLNSTPHRRNSIALSNRAHVKLIDNIW 568
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 28.7 bits (61), Expect = 0.64
Identities = 26/121 (21%), Positives = 57/121 (47%)
Frame = -1
Query: 565 TTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRRPF 386
TTT+ P + + + + P G K L S+ + +SN IS + + S+ TSS
Sbjct: 55 TTTIYPTSNVASNTSENY--PYTGSKSLSSSSI-LSNSTISTSSSTPITASVPTSSSILS 111
Query: 385 SPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMVVE 206
+ + T P++ S ++ +S +S+S ++S++ + +G ++ F ++
Sbjct: 112 NSTIPTTSPVPTTSSTPTSSSILSNSTIPSSSSISASTITTTIISGSTQFTTTFVDQSID 171
Query: 205 S 203
+
Sbjct: 172 T 172
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 0.64
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = -1
Query: 415 SLNTSSRRPFSPALSN-TDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSR 239
S+ +SS S +SN + + PS+ + S++ + +L S +SSS ++ + +
Sbjct: 753 SITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTL-ATSLYLSSSSSRTISTSSTNE 811
Query: 238 LMVGFFTMVVESTWKSFSLVSLAL-KGTCQ*PWKNITLKSAAAAFGSMVSSE 86
F V ST S S SLA KG ++ L+S ++ + +++
Sbjct: 812 YNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTD 863
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.64
Identities = 27/124 (21%), Positives = 54/124 (43%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T L+ T + S+ TP L ++ S+ +++ T + +LNTS+
Sbjct: 661 TSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPI 720
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + + S+ +ST SSS+ + S ++ T +
Sbjct: 721 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPI 780
Query: 211 VEST 200
ST
Sbjct: 781 TSST 784
Score = 28.3 bits (60), Expect = 0.84
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
S T S + + +LN TP L S+ S+ +++ T + +LNTS+
Sbjct: 3026 SSTVVNSSTPITSSTALNT-STPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPI 3084
Query: 391 PFSPAL-SNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTM 215
S L S+T SS+ S T I S+ +ST+ SSS+ + S ++ T
Sbjct: 3085 TSSSVLNSSTAITSSSIVNSSTPITS-SSVLNSSTAITSSSILNSSTPITSSSILNSSTP 3143
Query: 214 VVEST 200
+ ST
Sbjct: 3144 ITSST 3148
Score = 27.9 bits (59), Expect = 1.1
Identities = 27/124 (21%), Positives = 53/124 (42%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T L+ T + S+ TP L ++ S+ +++ T + +LNTS+
Sbjct: 2821 TSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSI 2880
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + S+ +ST SS++ + S +V T +
Sbjct: 2881 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2940
Query: 211 VEST 200
ST
Sbjct: 2941 TSST 2944
Score = 26.6 bits (56), Expect = 2.6
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
S T S + + +LN TP L S+ S+ +++ T + +LNTS+
Sbjct: 3374 SSTVVNSSTPITSSTALNT-STPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPI 3432
Query: 391 PFSPAL-SNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFS 263
S + S+T SS+ S T I S+ +ST SSS+ +
Sbjct: 3433 TSSTVVNSSTPITSSSVLNSSTAIAS-SSILNSSTPITSSSVLN 3475
Score = 26.2 bits (55), Expect = 3.4
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ ++ L+ T + S+ TP L S+ S+ +++ T + +LNTS+
Sbjct: 3109 TSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPI 3168
Query: 391 PFSPAL-SNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSS 272
S L S+T SS+ S T I S+ +ST SS+
Sbjct: 3169 TSSSVLNSSTAITSSSIVNSSTPITS-SSVLNSSTPITSST 3208
Score = 25.8 bits (54), Expect = 4.5
Identities = 25/124 (20%), Positives = 54/124 (43%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T ++ T + ++ TP L ++ S+ +++ T + +LNTS+
Sbjct: 1729 TSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPI 1788
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + + S+ +ST SS++ + S +V T +
Sbjct: 1789 TSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 1848
Query: 211 VEST 200
ST
Sbjct: 1849 TSST 1852
Score = 25.8 bits (54), Expect = 4.5
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ ++ L+ T + S+ TP + S+ S+ +++ T + +LNTS+
Sbjct: 1921 TSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPI 1980
Query: 391 PFSPAL-SNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTM 215
S L S+T SS+ + T I S+ +ST SS++ + S +V T
Sbjct: 1981 TSSSVLNSSTPITSSSVLNTSTPITS-SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTP 2039
Query: 214 VVEST 200
+ ST
Sbjct: 2040 ITSST 2044
Score = 25.4 bits (53), Expect = 6.0
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T L+ T + S+ TP L S+ S+ +++ T + +NTS+
Sbjct: 1069 TSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 1128
Query: 391 PFSPALS-NTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTM 215
S AL+ +T SS+ S T I ++ ST SS++ + S +V T
Sbjct: 1129 TSSTALNTSTPITSSSVLNSSTPITS-STVVNTSTPITSSTVVNSSTPITSSTVVNTSTP 1187
Query: 214 VVEST 200
+ ST
Sbjct: 1188 ITSST 1192
Score = 25.4 bits (53), Expect = 6.0
Identities = 26/124 (20%), Positives = 53/124 (42%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ ++ L+ T + S+ TP L S+ S+ +++ T + +LNTS
Sbjct: 1225 TSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPI 1284
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + + S+ +ST SS++ + S ++ T +
Sbjct: 1285 TSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 1344
Query: 211 VEST 200
ST
Sbjct: 1345 TSST 1348
Score = 25.4 bits (53), Expect = 6.0
Identities = 25/124 (20%), Positives = 54/124 (43%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ ++ L+ T + ++ TP L +++ S+ +++ T + +LNTS+
Sbjct: 1249 TSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTSI 1308
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + S+ +ST SS++ + S +V T +
Sbjct: 1309 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPI 1368
Query: 211 VEST 200
ST
Sbjct: 1369 TSST 1372
Score = 25.4 bits (53), Expect = 6.0
Identities = 25/124 (20%), Positives = 53/124 (42%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T ++ T + ++ TP L ++ S+ +++ T + +LNTS+
Sbjct: 2593 TSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSI 2652
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + S+ +ST SS++ + S +V T +
Sbjct: 2653 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2712
Query: 211 VEST 200
ST
Sbjct: 2713 TSST 2716
Score = 25.4 bits (53), Expect = 6.0
Identities = 25/124 (20%), Positives = 53/124 (42%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T ++ T + ++ TP L ++ S+ +++ T + +LNTS+
Sbjct: 2917 TSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSI 2976
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + S+ +ST SS++ + S +V T +
Sbjct: 2977 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 3036
Query: 211 VEST 200
ST
Sbjct: 3037 TSST 3040
Score = 25.4 bits (53), Expect = 6.0
Identities = 25/124 (20%), Positives = 55/124 (44%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ +T ++ T + S+ TP + ++ S+ +++ T + +LNTS+
Sbjct: 3253 TSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPI 3312
Query: 391 PFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFSV*NNGCSRLMVGFFTMV 212
S L+++ SS + + + S+ +ST+ SSS+ + S ++ T +
Sbjct: 3313 TSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPI 3372
Query: 211 VEST 200
ST
Sbjct: 3373 TSST 3376
Score = 25.0 bits (52), Expect = 7.9
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
+ ++ L+ T + S+ TP L S+ S+ +++ T + +LNTS+
Sbjct: 3337 TSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPI 3396
Query: 391 PFSPAL-SNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSL 269
S L S+T S++ S T I +L ST SS++
Sbjct: 3397 TSSSVLNSSTPITSSTVVNSSTPITSSTAL-NTSTPITSSTV 3437
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.1
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = -1
Query: 571 SDTTTLSPXTMFGAGSLNIFETPNLGIKGLRSNLLFISNFGISNFTFLLVGLSLNTSSRR 392
S + T S T+ + S + + +S+ F S S+ T S ++SS R
Sbjct: 333 SSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSR 392
Query: 391 PFSPAL--SNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSS 272
P S + S+ SS S ++ + Y NSTS SSS
Sbjct: 393 PASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSS 434
Score = 27.1 bits (57), Expect = 2.0
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = -1
Query: 478 SNLLFISNFGISNFTFLLVGLSLNTSSRRPFSPA-----LSNTDDKPSSLS-GSRTNIRK 317
S+ + S+ S+F+ L S+++SS SP +S++ PSS S S T+ K
Sbjct: 304 SSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSK 363
Query: 316 PDSLYGNSTSCASSS 272
S + ++ S +SS+
Sbjct: 364 SSSSFSSTVSSSSST 378
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 430 LLVGLSLN-TSSRRPFSPALSNTDDKPSSLSG 338
L G +N T R F PAL N +KP ++G
Sbjct: 89 LFAGEHINFTEDRAVFHPALRNVSEKPMKVNG 120
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 450 PKFEIKSKLDLKPLMPKFGVSKIFNEPAPNIV 545
P+F K+ LD + +FG SK+ + P+ ++
Sbjct: 2200 PRFVFKNHLDCTVSLREFGSSKVLHLPSNELI 2231
>SPAC11D3.10 |||nifs homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 434
Score = 25.8 bits (54), Expect = 4.5
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 264 ENKELEAQLV--ELPY--KESGFRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFR-LRPTN 428
+N LE +LV E Y S F V K GLSSV+ +G+K ++D+ RP
Sbjct: 125 QNDGLEVRLVPNEGQYHANASTFAPYVDSRTKAIGLSSVMFHSGQKNDVKDIANAFRPKG 184
Query: 429 RKVKLEMPKFEIKSKLDLKPL 491
V ++ + SK+D++ L
Sbjct: 185 IHVLADLTQQVGLSKIDVQDL 205
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 360 SSVLDKAGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLMPKFGVSKIFNEP 530
S+V+D+ GEK + V +R K +L + +I ++++ L+ +G + + EP
Sbjct: 808 SNVMDEQGEKQKDDVVDMVRKITEKAQLFLSHEQITIRVEMLKLL-SYGSNVLAKEP 863
>SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 261 TENKELEAQLVELPYKESGFRMLVLLPDKLDGLSSVLD 374
T+NK L A EL E+G +L +P+ + L +L+
Sbjct: 144 TKNKVLYAITSELKLNEAGIALLDKIPNSWEMLIEILE 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,478,228
Number of Sequences: 5004
Number of extensions: 53513
Number of successful extensions: 274
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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