Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A07
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-12|CAB70221.2|  415|Caenorhabditis elegans Hypothetical p...    30   1.3  
Z75540-7|CAB70215.2|  415|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    28   4.0  
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas...    27   7.0  
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal...    27   7.0  
Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z79600-12|CAB70221.2|  415|Caenorhabditis elegans Hypothetical
           protein F37D6.6 protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 7   VFLNMEKAFDRVWYEGLIYKLTQSRAFRRFLRKVASFHDHRVVVVVEGDASSEIPVRA 180
           VF    +  +R+W   L+    + RA RRFLR +  F    V V+ +   S  +  +A
Sbjct: 8   VFSERRRHVERLWRRRLLVTSDERRARRRFLRLMRGFDAEDVEVIRKAVESDGVDSKA 65


>Z75540-7|CAB70215.2|  415|Caenorhabditis elegans Hypothetical
           protein F37D6.6 protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 7   VFLNMEKAFDRVWYEGLIYKLTQSRAFRRFLRKVASFHDHRVVVVVEGDASSEIPVRA 180
           VF    +  +R+W   L+    + RA RRFLR +  F    V V+ +   S  +  +A
Sbjct: 8   VFSERRRHVERLWRRRLLVTSDERRARRRFLRLMRGFDAEDVEVIRKAVESDGVDSKA 65


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -3

Query: 220 PRTTLAAPG*SASLRAPESQRKRLPQPLPQHDDH 119
           P TT  AP     +R PE+     P P PQ   H
Sbjct: 329 PATTRPAPASQPPVREPETPDSGYPSPAPQEPAH 362


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
 Frame = +1

Query: 4   LVFLNMEKAFDRVWYEGLIYKLTQSRAFRRFLRKVASFHDHRVVVVVEGDASSE------ 165
           +++L+  KAFDR+ ++ L+ KL   R  +  L  V  F  +R   V  G   S       
Sbjct: 16  IIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATC 75

Query: 166 --------IPVRAGLLISRAQLVL--------FADVAYFTLSLNKNYAPVYLRPTLDALP 297
                    P+  G+ ++    +L        FAD      S  K  +   L+  LDA+ 
Sbjct: 76  GVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTESENNLQSALDAVV 135

Query: 298 DWLDRWRLSANVA*TQAMISGR 363
           DW    +L+ N + T  +  G+
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGK 157


>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
            protein.
          Length = 1237

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 419  AATAAGLLPSGETDG*EGNLPLIIAW 342
            AATAA   P  ET+G    +PL+  W
Sbjct: 1179 AATAAAAAPKAETNGKTEKVPLVQQW 1204


>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
            atpase protein3, isoform b protein.
          Length = 1234

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 419  AATAAGLLPSGETDG*EGNLPLIIAW 342
            AATAA   P  ET+G    +PL+  W
Sbjct: 1179 AATAAAAAPKAETNGKTEKVPLVQQW 1204


>Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical
           protein C25G4.4 protein.
          Length = 424

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 133 VVVVEGDASSEIPVRAGLLISRAQLVLF 216
           + + EGDAS  +PV  G++  +  L LF
Sbjct: 68  ITIPEGDASPTVPVSCGVVNGKMHLNLF 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,633,031
Number of Sequences: 27780
Number of extensions: 259414
Number of successful extensions: 878
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)