Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A05
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 224 PRGAGGIPTS 195
           PRG GG+PTS
Sbjct: 399 PRGPGGVPTS 408


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 374 PSPCSRSRPLDRPPDDWI 321
           P  C R R LD P D  I
Sbjct: 565 PPQCPRFRKLDSPSDSGI 582


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 342 VQGTRSRTW*RQPNSLPLPTSN 407
           +QGT+++ W R    L L  SN
Sbjct: 15  IQGTQAQHWSRGNTWLSLDNSN 36


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 342 VQGTRSRTW*RQPNSLPLPTSN 407
           +QGT+++ W R    L L  SN
Sbjct: 15  IQGTQAQHWSRGNTWLSLDNSN 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,669
Number of Sequences: 438
Number of extensions: 1863
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)