Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A04
(473 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1040 + 8163654-8163704,8163814-8163935,8164011-8164092,816... 76 2e-14
03_06_0143 + 31962241-31962291,31962385-31962506,31962572-319626... 75 3e-14
12_01_0722 + 6355972-6359031 36 0.022
12_01_0740 + 6646471-6649407 34 0.051
12_01_0741 + 6649988-6653065 32 0.27
12_01_0727 + 6446283-6449300 31 0.36
12_01_0715 - 6230393-6231559,6233234-6234553 31 0.63
12_02_0589 + 20850249-20850491,20850583-20851839 30 0.83
12_01_0736 + 6582371-6585370 30 0.83
12_01_0718 + 6339982-6342981 30 0.83
12_01_0731 - 6516894-6517473,6517485-6519574 30 1.1
01_01_0421 + 3181139-3184207 29 1.4
12_01_0686 - 5855216-5858263 29 1.9
01_01_0424 + 3200223-3200634,3200677-3200836,3200987-3201342,320... 29 1.9
04_04_0529 - 25997736-25998055,25998441-25998804,25999563-259996... 29 2.5
12_01_0708 - 6137865-6140909 28 4.4
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 28 4.4
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 28 4.4
12_01_0714 + 6223269-6226250 27 5.8
10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593 27 5.8
01_01_0423 + 3198075-3199010 27 7.7
>06_01_1040 +
8163654-8163704,8163814-8163935,8164011-8164092,
8164166-8164213,8164516-8164671,8164747-8164843,
8164942-8164984,8165375-8165442,8165533-8165617,
8165698-8165746,8165968-8166040,8166119-8166179,
8167114-8167180,8167400-8167453,8167537-8167665,
8168192-8168255,8168366-8168439,8168523-8168576,
8168696-8168764,8169394-8169483,8169656-8169763,
8169876-8169923
Length = 563
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = +2
Query: 206 ILLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIALRNRQNKP 385
I LDYS+ R ET+ L LA++ +++ + MFSG KIN TE+R+VLH+ALR +++
Sbjct: 63 IFLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMFSGDKINSTENRSVLHVALRAPRDEV 122
Query: 386 ILVNGTDVTPDVNAVLKHMKEFSHQIISG 472
I +G +V P+V V +K+FS SG
Sbjct: 123 IKSDGVNVVPEVWGVKDKIKQFSETFRSG 151
>03_06_0143 +
31962241-31962291,31962385-31962506,31962572-31962671,
31962775-31962822,31963096-31963251,31963330-31963426,
31963525-31963567,31963970-31964037,31964139-31964223,
31964297-31964345,31964566-31964638,31964708-31964768,
31965417-31965483,31965709-31965762,31965854-31965982,
31966485-31966548,31966655-31966728,31966793-31966867,
31966972-31967040,31967759-31967848,31968014-31968121,
31968251-31968298
Length = 576
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +2
Query: 206 ILLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIALRNRQNKP 385
I LDYS+ R ET+ L LA++ +++ + MF G KIN TE+R+VLH+ALR +++
Sbjct: 69 IYLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMFRGDKINSTENRSVLHVALRAPRDEV 128
Query: 386 ILVNGTDVTPDVNAVLKHMKEFSHQIISG 472
I NG +V P+V V +K+FS SG
Sbjct: 129 INSNGVNVVPEVWGVKDKIKQFSETFRSG 157
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSG 316
FN F +P P G I LDYS NR + ++ L KS V +A D SG
Sbjct: 594 FNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYL-KSTVVLKASDNSLSG 644
>12_01_0740 + 6646471-6649407
Length = 978
Score = 34.3 bits (75), Expect = 0.051
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSG 316
FN F +P P G I LDYS NR + ++ L K+ V +A D SG
Sbjct: 553 FNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYL-KNTVVLKASDNSLSG 603
>12_01_0741 + 6649988-6653065
Length = 1025
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISL 256
FN F +P P G + LDYS NR + + L
Sbjct: 587 FNNFEGTIPIPEQGSVTLDYSNNRFSSMPMPL 618
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 31.5 bits (68), Expect = 0.36
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKS 277
FN +P P +G + LDYS NR + ++ L K+
Sbjct: 580 FNNIEGAIPIPKEGSVTLDYSNNRFSSLPLNFSTYLTKT 618
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 30.7 bits (66), Expect = 0.63
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 95 EYYNLNSDKINIPQLFQQEPDRFNKFSLRLPTPNDGEILLDYSKNR 232
++ ++ SD +P + FN +P P +G + LDYS NR
Sbjct: 480 KFTSIGSDHPLLPVYIEFFDLSFNNIEGVIPIPKEGSVTLDYSNNR 525
>12_02_0589 + 20850249-20850491,20850583-20851839
Length = 499
Score = 30.3 bits (65), Expect = 0.83
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 32 SIIKMEPKINLKQDPAFQKLQEYYNLNSDKINIPQLFQQEPDRFNKFS 175
++++ME + + K+ A+ L Y SD+ N+ +++++ + F KFS
Sbjct: 255 ALVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFS 302
>12_01_0736 + 6582371-6585370
Length = 999
Score = 30.3 bits (65), Expect = 0.83
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKS 277
FNK +P P G I LDYS N+ + ++ L K+
Sbjct: 575 FNKIEGVIPIPQKGSITLDYSNNQFSSMPLNFSTYLKKT 613
>12_01_0718 + 6339982-6342981
Length = 999
Score = 30.3 bits (65), Expect = 0.83
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKS 277
FNK +P P G I LDYS N+ + ++ L K+
Sbjct: 575 FNKIEGVIPIPQKGSITLDYSNNQFSSMPLNFSTYLKKT 613
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNR 232
FN +P P +G + LDYS NR
Sbjct: 587 FNNIEGTIPIPKEGSVTLDYSNNR 610
>01_01_0421 + 3181139-3184207
Length = 1022
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNR 232
FNKF +P P + +LDYS NR
Sbjct: 598 FNKFEGPIPLPQNSGTVLDYSNNR 621
>12_01_0686 - 5855216-5858263
Length = 1015
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKSRNVEQARDAM 307
FN +P P +G LDYS N+ + + L L ++ + +R+ +
Sbjct: 592 FNSIEGPIPIPQEGSSTLDYSSNQFSSIPLHYLTYLGETLTFKASRNKL 640
>01_01_0424 +
3200223-3200634,3200677-3200836,3200987-3201342,
3201958-3203252
Length = 740
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNRVDNETISLLLNLAKSRNVEQARD 301
FN F +P P + +LDYS NR + ++ L + + +R+
Sbjct: 316 FNMFEGTIPLPQNSRFVLDYSNNRFSSIPTNISTQLGYTAYFKASRN 362
>04_04_0529 -
25997736-25998055,25998441-25998804,25999563-25999675,
25999880-25999989,26000155-26000311,26000390-26000915,
26001101-26001265,26002470-26002589,26003022-26003093,
26003422-26003499,26003965-26004057,26004491-26004647,
26005351-26005589,26006907-26007050,26007637-26007666,
26010610-26010993,26011486-26011554,26012353-26012418,
26013166-26013255,26013583-26013628,26014318-26014419,
26014552-26014694
Length = 1195
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 236 DNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIA-LRNRQNKPILVNGTDVT 412
+ ET S +LNL K N+ DA +GK+ F+E A+ H+ L P+ + D+
Sbjct: 298 ERETSSEILNLGKFANLPLPLDAEQAGKR-GFSEASALEHVKYLAALGPHPVGSDSIDLA 356
Query: 413 PD-VNAVLKHMKEFSH 457
V AV +K+ +H
Sbjct: 357 VQYVYAVADKIKKTAH 372
>12_01_0708 - 6137865-6140909
Length = 1014
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKNR 232
FN +P P +G +LDYS N+
Sbjct: 593 FNSIEGPIPVPQEGSTMLDYSSNQ 616
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 2 SCRTFTARVFSIIKMEPKINLKQDPAFQKLQEYYNLNSDK 121
SC A +++M+ +++L D L+++ LNS+K
Sbjct: 539 SCNALVAAKNRLVEMQMELDLANDSKHDALRDFEGLNSEK 578
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 388 DRFVLSIAESNMKDSSVFSEIDLFT*KHCISGLFYISALG 269
D +L A +KDS S ++ F + SG+F+++ LG
Sbjct: 551 DNDILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLG 590
>12_01_0714 + 6223269-6226250
Length = 993
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 209 LLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIALRN 370
+L SKN+ ++ K R + +++ SG NF++D ++ ++ L N
Sbjct: 272 VLQLSKNKFQGSFPPIIFQHKKLRTINLSKNPGISGNLPNFSQDTSLENLFLNN 325
>10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593
Length = 1278
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 197 DGEILLDYSKNRVDNETISLLLNLAK 274
D ILLD SKNR+ E S L NLA+
Sbjct: 717 DALILLDLSKNRLSGEIPSELGNLAQ 742
>01_01_0423 + 3198075-3199010
Length = 311
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 161 FNKFSLRLPTPNDGEILLDYSKN 229
FN F +P P D +LDYS N
Sbjct: 35 FNMFEGPIPLPRDSGTVLDYSNN 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,229,833
Number of Sequences: 37544
Number of extensions: 232885
Number of successful extensions: 564
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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