Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A04
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 165 1e-41
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 164 3e-41
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 1.3
U80448-7|AAB37820.1| 260|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 29 2.3
U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 27 5.2
U40941-7|AAA81712.1| 312|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical ... 27 6.9
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 9.1
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 27 9.1
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 27 9.1
U40800-10|AAA81495.2| 186|Caenorhabditis elegans Hypothetical p... 27 9.1
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 27 9.1
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 27 9.1
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 165 bits (401), Expect = 1e-41
Identities = 78/142 (54%), Positives = 105/142 (73%)
Frame = +2
Query: 47 EPKINLKQDPAFQKLQEYYNLNSDKINIPQLFQQEPDRFNKFSLRLPTPNDGEILLDYSK 226
E ++L QD F +L+ + N + +LF+++P RF KF+ TP DG+ L D+SK
Sbjct: 33 EKAMSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSK 91
Query: 227 NRVDNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIALRNRQNKPILVNGTD 406
NR+ +E+ LL+ LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+G D
Sbjct: 92 NRITDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKD 151
Query: 407 VTPDVNAVLKHMKEFSHQIISG 472
V PDVN VL HMKEF ++IISG
Sbjct: 152 VMPDVNRVLAHMKEFCNEIISG 173
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 164 bits (398), Expect = 3e-41
Identities = 77/139 (55%), Positives = 104/139 (74%)
Frame = +2
Query: 56 INLKQDPAFQKLQEYYNLNSDKINIPQLFQQEPDRFNKFSLRLPTPNDGEILLDYSKNRV 235
++L QD F +L+ + N + +LF+++P RF KF+ TP DG+ L D+SKNR+
Sbjct: 1 MSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRI 59
Query: 236 DNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIALRNRQNKPILVNGTDVTP 415
+E+ LL+ LAKSR VE++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+G DV P
Sbjct: 60 TDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMP 119
Query: 416 DVNAVLKHMKEFSHQIISG 472
DVN VL HMKEF ++IISG
Sbjct: 120 DVNRVLAHMKEFCNEIISG 138
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 343 SCPSYCSPQSTKQTYLSQWDGCHSRC*CSSEAH 441
SCP C PQ T Q Q C C + H
Sbjct: 522 SCPQLCQPQCTSQCVQQQQCPCQQTCQTGCQQH 554
>U80448-7|AAB37820.1| 260|Caenorhabditis elegans Hypothetical
protein F59A3.7 protein.
Length = 260
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 2 SCRTFTARVFSIIKMEPKINLKQDPAFQKLQEYYNL 109
SC AR+ ++K ++ + PAF QE YNL
Sbjct: 207 SCVAGVARILKMMKTRKEVMFQSVPAFLNKQELYNL 242
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 28.7 bits (61), Expect = 2.3
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 18/164 (10%)
Frame = +2
Query: 20 ARVFSIIKMEPKINLKQDPAFQKLQEYYNLNSDKINIPQLFQQEP----DR---FNKFS- 175
A F ++K+ P N K A K + + K+N + +E DR FN++S
Sbjct: 80 AEKFGVVKIVPPANFKPPFAIDKEAFTFRPRTQKLNEVEAIVKEKHTFIDRLINFNRYSG 139
Query: 176 --LRLPTPNDGEILLDYSKNR-VDNETISLLLNL-AKSRNVEQA---RDAMFSGKK---I 325
P DG I+ Y +R V N +N K R+V + ++ M G I
Sbjct: 140 LTFEFPVDRDGNIVDLYRLHRIVQNFGGCEEVNEDEKWRDVAREYLPKEQMARGVPSAFI 199
Query: 326 NFTEDRAVLHIALRNRQNKPILVNGTDVTPDVNAVLKHMKEFSH 457
N LHI NR K + D + D LKH + H
Sbjct: 200 NLIRSHYNLHIEPFNRNLKEKAMKNDDESDDEMEELKHKYQHHH 243
>U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical
protein ZC196.6 protein.
Length = 491
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +2
Query: 191 PNDGEILLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHIALRN 370
PNDG + S++R NE + L N ++V+++ NF + + + L
Sbjct: 399 PNDGSSNGEKSEDRDANEIMDLSQNPPTDQSVKESSAPPLENPS-NFQPETSNKYADLTL 457
Query: 371 RQNKPILVNGTDVTPDVNAVLKHMKEFSHQ 460
+ +N D+T ++ A+ + EF++Q
Sbjct: 458 DDLEFDSLNSNDMTNELEALKEETPEFNNQ 487
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 77 AFQKLQEYYNLNSDKINIPQLFQQEPDRFNKFSLRLPTPNDGEILLDYSKNRV 235
A ++L+E + L++ + IP+ F Q + ++ L+ P PN + +NR+
Sbjct: 140 ATRRLKESHPLDNQQHVIPEYFVQSYENAIEYLLKTPRPNGPLDTCEQIENRI 192
>U40941-7|AAA81712.1| 312|Caenorhabditis elegans Hypothetical
protein F35C8.8 protein.
Length = 312
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 129 MLILSEFKL*YS-CSFWKAGSCFKLIFGSIFIIENTRAVKVR 7
+L+L L +S C F +GSC KL F F++++ V R
Sbjct: 153 LLLLHTLSLSFSWCHFIISGSCGKLTFDFFFLLKSNYTVVYR 194
>AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical
protein T12B3.4 protein.
Length = 292
Score = 27.1 bits (57), Expect = 6.9
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +2
Query: 179 RLPTPNDGEILLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGKKINFTEDRAVLHI 358
RLP P ++L+D+ + R+++E I S NV +D KKI R +H+
Sbjct: 171 RLPAPQYMQLLMDWIEVRINDEHI-----FPSSTNVSFPKDFRQICKKILTRLFRVFVHV 225
Query: 359 ALRNRQNKPILVNGTDVTPDVNAVLKHMKEF 451
+ + + P N + KH F
Sbjct: 226 YIHHFDR----IRELGAEPHANTLYKHFYFF 252
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 26.6 bits (56), Expect = 9.1
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 209 LLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGK-KINFTEDRAVLHIALRNRQNKP 385
LL+YSK+ + I K ++++ D +GK K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHYELEKHIKFN---HKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 386 ILVNGTDVTPDVNAVLKHMKEFSHQII 466
+L +G TP+ + +F +II
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRII 173
>Z50872-4|CAA90757.2| 498|Caenorhabditis elegans Hypothetical
protein C05D12.1 protein.
Length = 498
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 266 NLVAN*WFHYPLCFLNNLVRFPHHLEW 186
N+ + WFH P C +NL +EW
Sbjct: 31 NVTRSCWFHPPECAADNLAACQSGVEW 57
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 340 PSCPSYCSPQSTKQTYLSQWDGCHSRC 420
P P CSP + + S+W C C
Sbjct: 1193 PCAPGSCSPSAGGWSLWSEWSSCSKDC 1219
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 340 PSCPSYCSPQSTKQTYLSQWDGCHSRC 420
P P CSP + + S+W C C
Sbjct: 1193 PCAPGSCSPSAGGWSLWSEWSSCSKDC 1219
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 98 YYNLNSDKINIPQLFQQEPDRFNKFSL-RLPTPNDGEILLDYSKNRVDNE 244
+ LN I P LF+ + F+ R P P D ++L+DY KN+++++
Sbjct: 285 FIGLNLVTITFP-LFEYQVKMALSFATGRAPIP-DRKMLIDYEKNQIEHQ 332
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 268 SQEQKCRTSQRCNVFR*KDQFH*RPSCPSYCSPQSTKQTYLSQWDGCHSRC 420
S E C Q+ +V +D + SCPS C P ++Q +Q + C S C
Sbjct: 362 SCESSCVQQQQPSVVVVQDS---QSSCPSACQPSCSQQCIQAQ-NLCQSAC 408
>U40800-10|AAA81495.2| 186|Caenorhabditis elegans Hypothetical
protein D2096.2a protein.
Length = 186
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 42 KWNRKLT*NRIQLSKNYKNTII*IQIKSTFLS 137
KWN ++ N + NY TII + + TF+S
Sbjct: 42 KWNNRIISNLLYFQTNYFVTIITLFLLHTFIS 73
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 26.6 bits (56), Expect = 9.1
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 209 LLDYSKNRVDNETISLLLNLAKSRNVEQARDAMFSGK-KINFTEDRAVLHIALRNRQNKP 385
LL+YSK+ + I K ++++ D +GK K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHYELEKHIKFN---HKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 386 ILVNGTDVTPDVNAVLKHMKEFSHQII 466
+L +G TP+ + +F +II
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRII 173
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 340 PSCPSYCSPQSTKQTYLSQWDGCHSRC 420
P P CSP + + S+W C C
Sbjct: 1193 PCAPGSCSPSAGGWSLWSEWSSCSKDC 1219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,967,914
Number of Sequences: 27780
Number of extensions: 224106
Number of successful extensions: 658
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -