Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A03
         (485 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.4  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   4.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 12/53 (22%), Positives = 19/53 (35%)
 Frame = +2

Query: 47  DLNIKTFVNNSMKNKYQCHASKHKS*CQRPRGHVVVLCH*TSEGTSGKPCSKN 205
           +LN+     N  +N   CH   +   C  P G +  +C    +      C  N
Sbjct: 220 ELNVDDCKPNPCQNGGTCHDLVNSFSCSCPSGTLGYICEINVDDCRPGACHNN 272


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 103 CKQAQKLMPKATGSRGCLV 159
           C Q      K TGS  CLV
Sbjct: 38  CYQRDLFRQKITGSENCLV 56


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 125 INFCACLHDTGIYFSLNYSQTFLYL 51
           I FC        ++ +++S TFL L
Sbjct: 250 IEFCRPTFSAARFYGIDFSNTFLGL 274


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 457 YDSKYLVL 434
           YDSKYLVL
Sbjct: 173 YDSKYLVL 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,871
Number of Sequences: 336
Number of extensions: 2475
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)