Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A03
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    26   0.60 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   4.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   4.2  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   7.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   9.7  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.2 bits (55), Expect = 0.60
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 346 DLFVNSQGTGIWRLNYYMSIIDYYHLLIFFIQLMVDSLGIMLMSP 212
           DL++ ++    W+  Y   +ID   L IFFI     ++GI++ +P
Sbjct: 461 DLYIQTRED--WK--YVAMVIDRLQLYIFFIVTTAGTVGILMDAP 501


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 218 VTTGCSCCMAFRTYPRWSNGTRQPR 144
           V  GCS C A  T  R+  G    R
Sbjct: 138 VAAGCSICAAQTTVKRYPTGVNATR 162


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 309 RQIPVP*LFTNRSHSAFIFHVSWVL 383
           RQ+P   L+T R H    F++S VL
Sbjct: 907 RQVPDVRLWTGRKHGEVDFYLSQVL 931


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +3

Query: 87  INTSVMQASTKVDAKGHGVTWL 152
           +   +   +T+ D   HG+TW+
Sbjct: 320 LTKELRNGNTRTDDSAHGMTWI 341


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 309  RQIPVP*LFTNRSHSAFIFHVSWVLDSTH*YRNF 410
            R IP   L+ +R H    FH+S VL     +R +
Sbjct: 905  RMIPDLHLWMSRRHGEVDFHLSQVLTGHGYFREY 938


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,817
Number of Sequences: 2352
Number of extensions: 9054
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)