Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A03
(485 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.25
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 4.0
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.0
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 7.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.2
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 9.2
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 9.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.2
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 9.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.25
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 346 DLFVNSQGTGIWRLNYYMSIIDYYHLLIFFIQLMVDSLGIMLMSP 212
DL++ ++ W+ Y +ID L IFF+ ++GI++ +P
Sbjct: 462 DLYIQTRED--WK--YVAMVIDRLQLYIFFLVTTAGTIGILMDAP 502
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 129 WHQLLCLLA*HWYLFFIELFTNVFIFRSLI 40
W ++ W FFI +FT + I +L+
Sbjct: 401 WRHFAAII--EWLSFFIVIFTYIIILITLV 428
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 4.0
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 230 YNVNVTTGCSCCMAFRTYP 174
Y V +T SC M F YP
Sbjct: 153 YMVKLTLKLSCAMNFLIYP 171
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 7.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 230 YNVNVTTGCSCCMAFRTYP 174
Y +T SC M F +YP
Sbjct: 122 YMSKLTLVLSCAMKFESYP 140
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.0 bits (42), Expect = 7.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 188 FRTYPRWSNG 159
F T PRW NG
Sbjct: 64 FITIPRWKNG 73
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 298 YMSIIDYYH 272
Y IIDYYH
Sbjct: 422 YKRIIDYYH 430
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 20.6 bits (41), Expect = 9.2
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 298 YMSIIDYYH 272
Y +I+DYYH
Sbjct: 421 YKTILDYYH 429
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 298 YMSIIDYYH 272
Y IIDYYH
Sbjct: 422 YKRIIDYYH 430
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 9.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 386 VEYP*NMKNESRM*SIC 336
VEYP N K S +IC
Sbjct: 177 VEYPQNSKRNSEESAIC 193
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 268 LIFFIQLMVDSLGIMLMSPLAVL 200
L+ I + V SLG++L++ +AVL
Sbjct: 132 LVAGIVIGVTSLGLLLLALVAVL 154
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 268 LIFFIQLMVDSLGIMLMSPLAVL 200
L+ I + V SLG++L++ +AVL
Sbjct: 103 LVAGIVIGVTSLGLLLLALVAVL 125
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 20.6 bits (41), Expect = 9.2
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 298 YMSIIDYYH 272
Y +I+DYYH
Sbjct: 421 YKTILDYYH 429
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 20.6 bits (41), Expect = 9.2
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 298 YMSIIDYYH 272
Y +I+DYYH
Sbjct: 47 YKTILDYYH 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,398
Number of Sequences: 438
Number of extensions: 2851
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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