Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O22
         (780 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M86737-1|AAA58660.1|  709|Homo sapiens high mobility group box p...   154   3e-37
BC091486-1|AAH91486.1|  633|Homo sapiens SSRP1 protein protein.       154   3e-37
BC005116-1|AAH05116.1|  709|Homo sapiens structure specific reco...   154   3e-37

>M86737-1|AAA58660.1|  709|Homo sapiens high mobility group box
           protein.
          Length = 709

 Score =  154 bits (374), Expect = 3e-37
 Identities = 82/156 (52%), Positives = 109/156 (69%), Gaps = 4/156 (2%)
 Frame = -1

Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
           KA++G LYPL++GFIYVHKPPVHIRF+EI+ VNFARG  ++T+SFDFEIE K G+ +TFS
Sbjct: 346 KASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARG-TTTTRSFDFEIETKQGTQYTFS 404

Query: 360 SIEKGEYDKLFNYISSKKLHVKNTG-KNDKALYDDDFGDSDTEKEPDAYLERVKAEAK-- 190
           SIE+ EY KLF+++++KKL++KN G K       D++ DSD E + DAYLER+K E K  
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSD-EDQHDAYLERMKEEGKIR 463

Query: 189 -XXXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
                             FNP + +E DVAEE+D+N
Sbjct: 464 EENANDSSDDSGEETDESFNPGE-EEEDVAEEFDSN 498



 Score = 43.6 bits (98), Expect = 8e-04
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = -2

Query: 698 IERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGH 573
           +E++      K  SG  YE+++++MK ++NR++T PG+F GH
Sbjct: 294 VEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGH 335


>BC091486-1|AAH91486.1|  633|Homo sapiens SSRP1 protein protein.
          Length = 633

 Score =  154 bits (374), Expect = 3e-37
 Identities = 82/156 (52%), Positives = 109/156 (69%), Gaps = 4/156 (2%)
 Frame = -1

Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
           KA++G LYPL++GFIYVHKPPVHIRF+EI+ VNFARG  ++T+SFDFEIE K G+ +TFS
Sbjct: 346 KASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARG-TTTTRSFDFEIETKQGTQYTFS 404

Query: 360 SIEKGEYDKLFNYISSKKLHVKNTG-KNDKALYDDDFGDSDTEKEPDAYLERVKAEAK-- 190
           SIE+ EY KLF+++++KKL++KN G K       D++ DSD E + DAYLER+K E K  
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSD-EDQHDAYLERMKEEGKIR 463

Query: 189 -XXXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
                             FNP + +E DVAEE+D+N
Sbjct: 464 EENANDSSDDSGEETDESFNPGE-EEEDVAEEFDSN 498



 Score = 43.6 bits (98), Expect = 8e-04
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = -2

Query: 698 IERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGH 573
           +E++      K  SG  YE+++++MK ++NR++T PG+F GH
Sbjct: 294 VEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGH 335


>BC005116-1|AAH05116.1|  709|Homo sapiens structure specific
           recognition protein 1 protein.
          Length = 709

 Score =  154 bits (374), Expect = 3e-37
 Identities = 82/156 (52%), Positives = 109/156 (69%), Gaps = 4/156 (2%)
 Frame = -1

Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
           KA++G LYPL++GFIYVHKPPVHIRF+EI+ VNFARG  ++T+SFDFEIE K G+ +TFS
Sbjct: 346 KASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARG-TTTTRSFDFEIETKQGTQYTFS 404

Query: 360 SIEKGEYDKLFNYISSKKLHVKNTG-KNDKALYDDDFGDSDTEKEPDAYLERVKAEAK-- 190
           SIE+ EY KLF+++++KKL++KN G K       D++ DSD E + DAYLER+K E K  
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSD-EDQHDAYLERMKEEGKIR 463

Query: 189 -XXXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
                             FNP + +E DVAEE+D+N
Sbjct: 464 EENANDSSDDSGEETDESFNPGE-EEEDVAEEFDSN 498



 Score = 43.6 bits (98), Expect = 8e-04
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = -2

Query: 698 IERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGH 573
           +E++      K  SG  YE+++++MK ++NR++T PG+F GH
Sbjct: 294 VEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGH 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,931,125
Number of Sequences: 237096
Number of extensions: 1750254
Number of successful extensions: 7244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7238
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)