Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O22
(780 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 195 7e-50
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 192 3e-49
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 192 3e-49
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 192 3e-49
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 195 bits (475), Expect = 7e-50
Identities = 99/154 (64%), Positives = 114/154 (74%), Gaps = 2/154 (1%)
Frame = -1
Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
KAAAGYLYPL++GFIY+HKPP+HIRFEEI+SVNFAR G S T+SFDFE+ LK G+VH FS
Sbjct: 346 KAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGS-TRSFDFEVTLKNGTVHIFS 404
Query: 360 SIEKGEYDKLFNYISSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLERVKAEA--KX 187
SIEK EY KLF+YI+ KKLHV NTGK+ D DFGDSD E EPDAYL R+KAEA K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNTGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 186 XXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
DF P++ ESDVAEEYD+N
Sbjct: 465 EDDDDGDSDEESTDEDFKPNE-NESDVAEEYDSN 497
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = -2
Query: 710 YRGRIERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKT 564
Y G++E++I SGP YEV+ K+MKV+I R++TGPG+F+GH T
Sbjct: 298 YEGKLEKEI--------SGPVYEVMGKVMKVLIGRKITGPGNFIGHSGT 338
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 718 LPFTEEELKDKYEGXITK 665
LPF+E EL+DKYEG + K
Sbjct: 287 LPFSEAELRDKYEGKLEK 304
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 192 bits (469), Expect = 3e-49
Identities = 98/154 (63%), Positives = 113/154 (73%), Gaps = 2/154 (1%)
Frame = -1
Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
KAAAGYLYPL++GFIY+HKPP+HIRFEEI+SVNFAR G S T+SFDFE+ LK G+VH FS
Sbjct: 346 KAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGS-TRSFDFEVTLKNGTVHIFS 404
Query: 360 SIEKGEYDKLFNYISSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLERVKAEA--KX 187
SIEK EY KLF+YI+ KKLHV N GK+ D DFGDSD E EPDAYL R+KAEA K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 186 XXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
DF P++ ESDVAEEYD+N
Sbjct: 465 EDDDDGDSDEESTDEDFKPNE-NESDVAEEYDSN 497
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = -2
Query: 710 YRGRIERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKT 564
Y G++E++I SGP YEV+ K+MKV+I R++TGPG+F+GH T
Sbjct: 298 YEGKLEKEI--------SGPVYEVMGKVMKVLIGRKITGPGNFIGHSGT 338
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 718 LPFTEEELKDKYEGXITK 665
LPF+E EL+DKYEG + K
Sbjct: 287 LPFSEAELRDKYEGKLEK 304
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 192 bits (469), Expect = 3e-49
Identities = 98/154 (63%), Positives = 113/154 (73%), Gaps = 2/154 (1%)
Frame = -1
Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
KAAAGYLYPL++GFIY+HKPP+HIRFEEI+SVNFAR G S T+SFDFE+ LK G+VH FS
Sbjct: 346 KAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGS-TRSFDFEVTLKNGTVHIFS 404
Query: 360 SIEKGEYDKLFNYISSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLERVKAEA--KX 187
SIEK EY KLF+YI+ KKLHV N GK+ D DFGDSD E EPDAYL R+KAEA K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 186 XXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
DF P++ ESDVAEEYD+N
Sbjct: 465 EDDDDGDSDEESTDEDFKPNE-NESDVAEEYDSN 497
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = -2
Query: 710 YRGRIERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKT 564
Y G++E++I SGP YEV+ K+MKV+I R++TGPG+F+GH T
Sbjct: 298 YEGKLEKEI--------SGPVYEVMGKVMKVLIGRKITGPGNFIGHSGT 338
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 718 LPFTEEELKDKYEGXITK 665
LPF+E EL+DKYEG + K
Sbjct: 287 LPFSEAELRDKYEGKLEK 304
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 192 bits (469), Expect = 3e-49
Identities = 98/154 (63%), Positives = 113/154 (73%), Gaps = 2/154 (1%)
Frame = -1
Query: 540 KAAAGYLYPLDKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKLGSVHTFS 361
KAAAGYLYPL++GFIY+HKPP+HIRFEEI+SVNFAR G S T+SFDFE+ LK G+VH FS
Sbjct: 346 KAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSGGS-TRSFDFEVTLKNGTVHIFS 404
Query: 360 SIEKGEYDKLFNYISSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLERVKAEA--KX 187
SIEK EY KLF+YI+ KKLHV N GK+ D DFGDSD E EPDAYL R+KAEA K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 186 XXXXXXXXXXXXXXXDFNPDKAKESDVAEEYDTN 85
DF P++ ESDVAEEYD+N
Sbjct: 465 EDDDDGDSDEESTDEDFKPNE-NESDVAEEYDSN 497
Score = 55.2 bits (127), Expect = 1e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = -2
Query: 710 YRGRIERQI*RXNNKGXSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKT 564
Y G++E++I SGP YEV+ K+MKV+I R++TGPG+F+GH T
Sbjct: 298 YEGKLEKEI--------SGPVYEVMGKVMKVLIGRKITGPGNFIGHSGT 338
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 718 LPFTEEELKDKYEGXITK 665
LPF+E EL+DKYEG + K
Sbjct: 287 LPFSEAELRDKYEGKLEK 304
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,450,522
Number of Sequences: 53049
Number of extensions: 552776
Number of successful extensions: 1376
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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