Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O21
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-10|CAB16516.1|  473|Caenorhabditis elegans Hypothetical p...   227   9e-60
U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81489-4|CAB04010.1|  361|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p...    28   6.7  
Z73102-12|CAA97406.1|  430|Caenorhabditis elegans Hypothetical p...    28   8.9  
Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AL032658-3|CAA21745.1|  152|Caenorhabditis elegans Hypothetical ...    28   8.9  
AF016424-6|AAB65333.1|  366|Caenorhabditis elegans Transforming ...    28   8.9  

>Z99281-10|CAB16516.1|  473|Caenorhabditis elegans Hypothetical
           protein Y57G11C.15 protein.
          Length = 473

 Score =  227 bits (554), Expect = 9e-60
 Identities = 104/119 (87%), Positives = 113/119 (94%)
 Frame = -1

Query: 655 PVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYI 476
           P+H ++Y++FMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHR+ SMIHELNRYI
Sbjct: 355 PIHCIIYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHREKSMIHELNRYI 414

Query: 475 PTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 299
           PTAAAFGGLCIGALSV ADF+GAIGSGTGILLAVTIIYQYFEIFVKEQ EMGG+S + F
Sbjct: 415 PTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTIIYQYFEIFVKEQQEMGGVSAMFF 473



 Score = 35.1 bits (77), Expect = 0.058
 Identities = 16/29 (55%), Positives = 16/29 (55%)
 Frame = -3

Query: 752 TWXXXXRPRXAPVXGLXXYLSPPESLAHI 666
           TW      R  P  GL  YLSPPESL HI
Sbjct: 323 TWSDNTGYRSYPTGGLCYYLSPPESLGHI 351


>U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical
           protein F01E11.5a protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/37 (35%), Positives = 26/37 (70%)
 Frame = -1

Query: 568 AKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAF 458
           AK  A+Q+  Q+ V+R H +++++HE++  +PT+  F
Sbjct: 213 AKHRARQIYRQK-VIRKHIESTILHEISHVLPTSDEF 248


>Z81489-4|CAB04010.1|  361|Caenorhabditis elegans Hypothetical
           protein C55A1.5 protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 454 GLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIF 344
           GL I  + VL  F  +I + T  +LAV  +Y+Y+ IF
Sbjct: 96  GLKIEIVQVLMAFYTSIYASTICMLAVQFVYRYWAIF 132


>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
            F18C12.2b protein.
          Length = 2271

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 552  FATSLAEEPDTSIQVFEKKAQEPSM 626
            FA SL + P+T++Q+F+  ++ P +
Sbjct: 1931 FADSLRDSPNTALQMFDSSSENPEL 1955


>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
            F18C12.2a protein.
          Length = 2279

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 552  FATSLAEEPDTSIQVFEKKAQEPSM 626
            FA SL + P+T++Q+F+  ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 378 ASSIPVPEPMAPRKSASTDRAPMHSPP 458
           A+  P PEP+ P K    + AP  S P
Sbjct: 206 AAETPAPEPLVPEKKPKIEDAPTTSSP 232


>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
            protein RME-8 protein.
          Length = 2279

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 552  FATSLAEEPDTSIQVFEKKAQEPSM 626
            FA SL + P+T++Q+F+  ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963


>Z73102-12|CAA97406.1|  430|Caenorhabditis elegans Hypothetical
           protein B0035.11 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 545 EGTADGDAR-SPRQLHDPRTEPLHPDGG 465
           E   D D+R +PRQL D   + +HP GG
Sbjct: 46  ESDDDDDSRPAPRQLSDSSDDNIHPRGG 73


>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 332 LFLDKDLEVLVNDGDGEQYPSAGADGPEEVGQH*QSPDAQSSE-RGRRRDVAVQF 493
           L L+K +EV+  DG  EQ    GA+  + +G+   S   +  + RGR    AV F
Sbjct: 374 LLLEKAVEVIKRDGLIEQSREVGAEFQKRLGELQASSGGKLDQARGRGTFAAVDF 428


>AL032658-3|CAA21745.1|  152|Caenorhabditis elegans Hypothetical
           protein Y76A2B.4 protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +3

Query: 309 VLMPPISACSLTKISKYW*MMVTASSIPVPEPMAPRKSASTDRAPMHSPP 458
           +L+P ++ C  + I+  + + +T  SI +    +P  S +T    +HSPP
Sbjct: 88  ILIPTLAVCITSAIATAYILQLT-QSIYLRLSQSPHSSPNTSYPRIHSPP 136


>AF016424-6|AAB65333.1|  366|Caenorhabditis elegans Transforming
           growth factor betafamily protein 2 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 72  RTRRHAHNTTPVGALPSTQQILNLKSNFFDK 164
           R+RR A +TTP+ A P  Q++   +S +F+K
Sbjct: 229 RSRRSA-STTPISAPPMRQKVKRSESAYFEK 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,596
Number of Sequences: 27780
Number of extensions: 309133
Number of successful extensions: 1054
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)