Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O19
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.8
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.8
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -1
Query: 579 GXPXPPXKXXXGXXXXGAPPXXXKPPPPPTXXXGGKKKVGGXXXXSPXTFGGGXPXS 409
G P PP G G PP PPPPP G P +G P S
Sbjct: 805 GGPRPPYPYPGGPVPPG-PPQNRMPPPPPAQGAPSPSGAAGSNGKQP-RYGTPAPPS 859
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = -2
Query: 575 PPXPPXKXXXGXXXGGPPXXXXNP----PPPXPXXXGGKK 468
PP PP GGPP P PPP P GG K
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -2
Query: 680 PPPPXKXFGXXXXPGIXLXREXXGGXXXXFFXXXXPPXPPXKXXXGXXXGGPPXXXXNPP 501
PPPP G G GG PP PP P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 500 PPXP 489
PP P
Sbjct: 786 PPPP 789
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1
Query: 531 GAPPXXXKPPPPPTXXXGGKKKVGGXXXXSPXTFGGGXPXSXXP 400
G PP PPPPP GG + G P GG P S P
Sbjct: 718 GLPPITGGPPPPP--PPGGLPPITGGPPPPPPP-GGLPPISGGP 758
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = -2
Query: 575 PPXPPXKXXXGXXXGGPPXXXXNP----PPPXPXXXGGKK 468
PP PP GGPP P PPP P GG K
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -2
Query: 680 PPPPXKXFGXXXXPGIXLXREXXGGXXXXFFXXXXPPXPPXKXXXGXXXGGPPXXXXNPP 501
PPPP G G GG PP PP P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 500 PPXP 489
PP P
Sbjct: 786 PPPP 789
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1
Query: 531 GAPPXXXKPPPPPTXXXGGKKKVGGXXXXSPXTFGGGXPXSXXP 400
G PP PPPPP GG + G P GG P S P
Sbjct: 718 GLPPITGGPPPPP--PPGGLPPITGGPPPPPPP-GGLPPISGGP 758
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = -2
Query: 575 PPXPPXKXXXGXXXGGPPXXXXNP----PPPXPXXXGGKK 468
PP PP GGPP P PPP P GG K
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -2
Query: 680 PPPPXKXFGXXXXPGIXLXREXXGGXXXXFFXXXXPPXPPXKXXXGXXXGGPPXXXXNPP 501
PPPP G G GG PP PP P PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 500 PPXP 489
PP P
Sbjct: 369 PPPP 372
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1
Query: 531 GAPPXXXKPPPPPTXXXGGKKKVGGXXXXSPXTFGGGXPXSXXP 400
G PP PPPPP GG + G P GG P S P
Sbjct: 301 GLPPITGGPPPPP--PPGGLPPITGGPPPPPPP-GGLPPISGGP 341
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -1
Query: 573 PXPPXKXXXGXXXXGAPPXXXKPPPP 496
P PP G G PP +PPPP
Sbjct: 40 PPPPWHRNRGPPPFGPPPPWDRPPPP 65
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 573 PXPPXKXXXGXXXXGAPPXXXKPPPPPTXXXGGKKKV 463
P PP GAPP PPPPP GG V
Sbjct: 633 PPPPPPMGLPAVGAGAPPP---PPPPPPSGAGGPASV 666
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 573 PXPPXKXXXGXXXXGAPPXXXKPPPPPTXXXG 478
P PP G GA PPPPP+ G
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 573 PXPPXKXXXGXXXXGAPPXXXKPPPPPTXXXGGKKKV 463
P PP GAPP PPPPP GG V
Sbjct: 459 PPPPPPMGLPAVGAGAPPP---PPPPPPSGAGGPASV 492
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 573 PXPPXKXXXGXXXXGAPPXXXKPPPPPTXXXG 478
P PP G GA PPPPP+ G
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical protein
ZK430.5 protein.
Length = 1276
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 269 RPKIREMTPXPF*NSSSLLHMSNYGPVNKKXKXXRETI 156
+PKIRE P NSS+L+ SNY + K +E I
Sbjct: 1129 KPKIRETEP----NSSNLILASNYNNITSKASLSQEPI 1162
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = -2
Query: 683 APPPPXKXFGXXXXPGIXLXREXXGGXXXXFFXXXXPPXPPXKXXXGXXXGG-PPXXXXN 507
+PPPP G G PP PP GG PP
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 506 PPPPXPXXXG 477
PPP P G
Sbjct: 296 SPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = -2
Query: 683 APPPPXKXFGXXXXPGIXLXREXXGGXXXXFFXXXXPPXPPXKXXXGXXXGG-PPXXXXN 507
+PPPP G G PP PP GG PP
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 506 PPPPXPXXXG 477
PPP P G
Sbjct: 317 SPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = -2
Query: 683 APPPPXKXFGXXXXPGIXLXREXXGGXXXXFFXXXXPPXPPXKXXXGXXXGG-PPXXXXN 507
+PPPP G G PP PP GG PP
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 506 PPPPXPXXXG 477
PPP P G
Sbjct: 302 SPPPPPPPRG 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,302,283
Number of Sequences: 27780
Number of extensions: 268616
Number of successful extensions: 1321
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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