Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O18
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical pr...   162   2e-40
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...   162   2e-40
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...    87   2e-17
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.        87   2e-17
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    56   4e-08
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    44   2e-04
Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical pr...    32   0.56 
AF068713-7|AAC17798.2|  359|Caenorhabditis elegans Hypothetical ...    30   2.3  
AL032631-7|CAB63337.2|  855|Caenorhabditis elegans Hypothetical ...    28   9.2  

>Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical protein
            F25H5.4 protein.
          Length = 852

 Score =  162 bits (394), Expect = 2e-40
 Identities = 79/126 (62%), Positives = 91/126 (72%)
 Frame = -2

Query: 570  YACLLNCSXPVXMEPCISFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAY 391
            YA +L    P  +EP +  V+   PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAY
Sbjct: 724  YASVLTAE-PRLLEP-VYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAY 781

Query: 390  LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGR 211
            LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP  P+    +  Q      K + ++  
Sbjct: 782  LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEG 841

Query: 210  SPRLNS 193
             P L++
Sbjct: 842  VPALDN 847


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
            protein.
          Length = 852

 Score =  162 bits (394), Expect = 2e-40
 Identities = 79/126 (62%), Positives = 91/126 (72%)
 Frame = -2

Query: 570  YACLLNCSXPVXMEPCISFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAY 391
            YA +L    P  +EP +  V+   PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAY
Sbjct: 724  YASVLTAE-PRLLEP-VYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAY 781

Query: 390  LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGR 211
            LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP  P+    +  Q      K + ++  
Sbjct: 782  LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEG 841

Query: 210  SPRLNS 193
             P L++
Sbjct: 842  VPALDN 847


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
            protein 1 protein.
          Length = 974

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 41/92 (44%), Positives = 57/92 (61%)
 Frame = -2

Query: 543  PVXMEPCISFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 364
            P  MEP  + V+   P   V  +Y VL +RRGHV  ++ + G+PM+ + AY+PV +SFGF
Sbjct: 829  PRLMEPYYT-VEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGF 887

Query: 363  TADLRSNTGGQAFPQCVFDHWQVLPWRPVRTS 268
              DLR +T GQAF    F HWQ++P  P+  S
Sbjct: 888  ETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 919


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 41/92 (44%), Positives = 57/92 (61%)
 Frame = -2

Query: 543 PVXMEPCISFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 364
           P  MEP  + V+   P   V  +Y VL +RRGHV  ++ + G+PM+ + AY+PV +SFGF
Sbjct: 704 PRLMEPYYT-VEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGF 762

Query: 363 TADLRSNTGGQAFPQCVFDHWQVLPWRPVRTS 268
             DLR +T GQAF    F HWQ++P  P+  S
Sbjct: 763 ETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 794


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 29/73 (39%), Positives = 39/73 (53%)
 Frame = -2

Query: 489 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 310
           A+G ++ VL++R+  V  E     T +F V + +PV ESF F   LR  T G A  Q  F
Sbjct: 769 ALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 828

Query: 309 DHWQVLPWRPVRT 271
            HWQV+   P  T
Sbjct: 829 SHWQVIDEDPYWT 841


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 24/58 (41%), Positives = 28/58 (48%)
 Frame = -2

Query: 444 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRT 271
           V  E     T +F V + +PV ESF F   LR  T G A  Q  F HWQV+   P  T
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 652


>Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical
           protein F29C12.4 protein.
          Length = 750

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = -2

Query: 534 MEPCISFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 355
           +EP +  V+ +VP    G +   L +R   +       G    I +A  P+++ FG+T++
Sbjct: 643 LEPIMK-VEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSE 699

Query: 354 LRSNTGGQ 331
           LRS T G+
Sbjct: 700 LRSLTEGK 707


>AF068713-7|AAC17798.2|  359|Caenorhabditis elegans Hypothetical
           protein T24A6.11 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 55  LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 174
           +L+ LR+C+       C + TC K FP ++V L+  ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328


>AL032631-7|CAB63337.2|  855|Caenorhabditis elegans Hypothetical
           protein Y106G6H.5 protein.
          Length = 855

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 179 ICPNIELSLGDLPSI-LSSFSFPVQRCRACSEVRTGLQGRTCQWSNTHCGK 328
           I P+    +GD+  + +SS  FP  RC+   E+  G+       S THCG+
Sbjct: 615 IGPSSRYLMGDITGLSMSSNDFPTFRCQ---EINIGMATGIRAISVTHCGE 662


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,451,828
Number of Sequences: 27780
Number of extensions: 330670
Number of successful extensions: 772
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)