Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O17
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 136 6e-32
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 136 6e-32
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 136 6e-32
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 135 2e-31
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 132 1e-30
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 35 0.29
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 35 0.29
BC050603-1|AAH50603.1| 562|Homo sapiens methyltransferase 10 do... 31 6.3
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 31 6.3
AK027410-1|BAB55094.1| 504|Homo sapiens protein ( Homo sapiens ... 30 8.3
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 224 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 283
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 284 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 343
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 344 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 373
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 136 bits (330), Expect = 6e-32
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 345 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 374
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 135 bits (326), Expect = 2e-31
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 239 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 298
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 299 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQA 358
Query: 328 RRENLKA-LADAEKSGLKLSKRNPAMKAEK 242
R L+ A A + L+ A A K
Sbjct: 359 RNHKLRVDKAAAAAAALQAKSDEKAAVAGK 388
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 132 bits (319), Expect = 1e-30
Identities = 61/126 (48%), Positives = 81/126 (64%)
Frame = -1
Query: 688 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 509
PG+ LAPGGH+GRF IW +SAF +LD L+G+W+ + K N+NLP +M
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEM 284
Query: 508 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELR 329
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 328 RRENLK 311
R L+
Sbjct: 345 RNHKLR 350
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 35.1 bits (77), Expect = 0.29
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -1
Query: 580 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 407
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 85
Query: 406 LTNNKAMLKLNPYAAVLKRKAILELRRRENLKALADAEKSGLKLSKRNPAMKAEKLRER 230
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 86 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 138
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 35.1 bits (77), Expect = 0.29
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -1
Query: 580 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 407
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 830
Query: 406 LTNNKAMLKLNPYAAVLKRKAILELRRRENLKALADAEKSGLKLSKRNPAMKAEKLRER 230
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 831 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 883
>BC050603-1|AAH50603.1| 562|Homo sapiens methyltransferase 10
domain containing protein.
Length = 562
Score = 30.7 bits (66), Expect = 6.3
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = -3
Query: 629 SSWT-FRHLDSVRIRQA*PLIRVMEDTIKTKEELQPAPTEDGQH*PHTSSQV**DQEGPP 453
+SW R R+RQ + R ED I+ EE +P P E G ++ QE P
Sbjct: 376 NSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESG----NSQELARGPQERTP 431
Query: 452 CSQQTRDPCYTQIE-PAH*QQGDAETQSLRGRAEEESYLRAAQKGELE 312
C R+ +E P Q+ ++ ++ +E R+ +KG +E
Sbjct: 432 CGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE----RSEEKGGVE 475
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 603 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRSG 463
+ PH A L G G Q K ++T P++R P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
>AK027410-1|BAB55094.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14504 fis, clone NT2RM1000272. ).
Length = 504
Score = 30.3 bits (65), Expect = 8.3
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = -3
Query: 629 SSWT-FRHLDSVRIRQA*PLIRVMEDTIKTKEELQPAPTEDGQH*PHTSSQV**DQEGPP 453
+SW R R+RQ + R ED I+ EE +P P E G QE P
Sbjct: 376 NSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNRQELARG----PQERTP 431
Query: 452 CSQQTRDPCYTQIE-PAH*QQGDAETQSLRGRAEEESYLRAAQKGELE 312
C R+ +E P Q+ ++ ++ +E R+ +KG +E
Sbjct: 432 CGPALREGEAAAVEGPCPSQESLSQEENPEPTEDE----RSEEKGGVE 475
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,030,593
Number of Sequences: 237096
Number of extensions: 1690192
Number of successful extensions: 3649
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3649
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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