Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O16
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353...    33   0.34 
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145...    32   0.45 
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678...    30   2.4  

>06_01_0493 -
           3536207-3537056,3537603-3537826,3538234-3538503,
           3539042-3539146
          Length = 482

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 753 MGXXXAKPVLPPPEDKNX*YXVXWNLPDKVTEDELRGHFYXXGKL 619
           +G     P L PP+D++        L +++TE +LR  FY  G++
Sbjct: 210 LGKAGEMPSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEI 254


>07_01_1143 -
           10711023-10711884,10713603-10713826,10714253-10714522,
           10715071-10715175
          Length = 486

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 732 PVLPPPEDKNX*YXVXWNLPDKVTEDELRGHFYXXGKLXV*XLYLE 595
           P L PP+D++        L  +VTE +LR  FY  G++    + L+
Sbjct: 217 PSLTPPDDESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQ 262



 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3

Query: 625 EIRXLXXVPXAQCAFVQYXSRNXXXXXXEKXFNXXGXFGKRLTIKWGXLQ 476
           EI  +  V    CAFV Y +R       E+  N     G RL + WG  Q
Sbjct: 253 EIETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQ 302


>02_02_0100 -
           6783821-6784339,6784815-6784984,6785062-6785164,
           6785291-6785454,6786781-6786821,6786933-6787129
          Length = 397

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 678 LPDKVTEDELRGHFYXXGKLXV*XLYLEPS 589
           LP  +TEDELR HF   GK+    + L+ S
Sbjct: 162 LPSSLTEDELREHFSPYGKIVEHQIMLDHS 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,741,533
Number of Sequences: 37544
Number of extensions: 125542
Number of successful extensions: 277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)