Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O16
         (783 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061516-1|AAL29064.1|  418|Drosophila melanogaster LD46870p pro...    52   9e-07
AE014297-14|AAF52166.2|  418|Drosophila melanogaster CG14641-PA ...    52   9e-07

>AY061516-1|AAL29064.1|  418|Drosophila melanogaster LD46870p
           protein.
          Length = 418

 Score = 52.0 bits (119), Expect = 9e-07
 Identities = 25/60 (41%), Positives = 32/60 (53%)
 Frame = -3

Query: 625 EIRXLXXVPXAQCAFVQYXSRNXXXXXXEKXFNXXGXFGKRLTIKWGXLQGRQGXTEXND 446
           EIR +  VP  QCAFVQY  RN      E+ FN     G++++IKW   Q +QG     D
Sbjct: 257 EIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQAKQGTAAKTD 316



 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -1

Query: 732 PVLPPPEDKNX*YXVXWNLPDKVTEDELRGHFYXXGKL 619
           P L PPED+N       NLP+++TE ELR  FY  G++
Sbjct: 221 PTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEI 258


>AE014297-14|AAF52166.2|  418|Drosophila melanogaster CG14641-PA
           protein.
          Length = 418

 Score = 52.0 bits (119), Expect = 9e-07
 Identities = 25/60 (41%), Positives = 32/60 (53%)
 Frame = -3

Query: 625 EIRXLXXVPXAQCAFVQYXSRNXXXXXXEKXFNXXGXFGKRLTIKWGXLQGRQGXTEXND 446
           EIR +  VP  QCAFVQY  RN      E+ FN     G++++IKW   Q +QG     D
Sbjct: 257 EIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQAKQGTAAKTD 316



 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -1

Query: 732 PVLPPPEDKNX*YXVXWNLPDKVTEDELRGHFYXXGKL 619
           P L PPED+N       NLP+++TE ELR  FY  G++
Sbjct: 221 PTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEI 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,153,627
Number of Sequences: 53049
Number of extensions: 197610
Number of successful extensions: 345
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)