Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O15
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4G3.15c |||CCR4-Not complex subunit Not2 |Schizosaccharomyce... 112 5e-26
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 50 4e-07
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 28 1.8
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 3.1
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 4.1
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 26 5.4
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 26 5.4
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 26 7.2
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 7.2
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 26 7.2
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 25 9.5
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 25 9.5
>SPCC4G3.15c |||CCR4-Not complex subunit Not2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 176
Score = 112 bits (270), Expect = 5e-26
Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Frame = -1
Query: 605 LLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDN---LNLTFAGPWADTPCR-PQDMDY 438
LL IR +S+ S +L LG DL ALG +L + ++ PWA+ + P
Sbjct: 5 LLPIIRMEDSEMS--TLQLGCDLAALGFDLAPVEEDRLISTNLFSPWAELNTKKPVSQPM 62
Query: 437 HVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEE 258
P N + A ++ ++ ++ LFY+FY DV+Q AAA EL NR WR+H E
Sbjct: 63 FKLPACYKN--VNPPPAISKIFQFSDETLFYIFYTMPRDVMQEAAAQELTNRNWRFHKEL 120
Query: 257 KVWIPQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKEFHLDYSKLEGRPQLPPH 93
+VW+ PGM +++T +ERG Y FFD +W+++ K+F L Y+ LE R Q H
Sbjct: 121 RVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKDFLLMYAALEDRAQSAVH 175
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 50.0 bits (114), Expect = 4e-07
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -1
Query: 359 DLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKVWIPQAPGMPMVEKTSTYERGTYYF 180
D LFY+FY G Q A EL + WR+H + W + M+ T +E G+Y +
Sbjct: 543 DTLFYMFYYRPGTYQQYIAGQELKKQSWRFHKKYTTWFQRHEEPKMI--TDEFESGSYRY 600
Query: 179 FDAH-NW-RKVPKEFHLDYSKLE 117
FD +W ++ +F Y LE
Sbjct: 601 FDFEGDWVQRKKADFRFTYQYLE 623
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 218 EKTSTYERGTYYFFDAHNWRKVPKEFHLDYSKLEGR 111
E YE Y++ HN RK+ FHL +++ R
Sbjct: 553 ELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKAR 588
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 346 ICSTVSLVTFYKLRLQQSYTIANGDIIWRRRCGSHK 239
I +V+L + RL Q+YT N ++ G HK
Sbjct: 298 ILLSVALFALFSSRLSQAYTFTNNALLCCHELGLHK 333
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -2
Query: 286 IANGDIIWRRRCGSH---KRPACQWS-RRLQRTNAAPTTSSMRTIGERCRK 146
+A+ D+IW R C H K C W L+R +S++ ER K
Sbjct: 143 LADDDVIWHRMCEQHINRKCEKCGWGLPLLERNTLYAAKASIQKRYERLTK 193
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 677 QTSPEGKVTNIPDTMIPNQFGIVGLLTFIRAAESDPSLVS 558
+ +PE +V I + M N+ G + L F ++ DP++VS
Sbjct: 142 EDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVS 181
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 476 WADTPCRPQDMDYHVPPEYLINGSIREKLAPLRLGRYKED 357
WAD P P D + + Y +G + K L G Y++D
Sbjct: 40 WADVPMGPPDPIFGITEAYKKDGDV--KKMNLGAGTYRDD 77
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -1
Query: 305 AAAELYNREWRYHMEEKVWIPQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKEFHLDYS 126
A+ N RY ++WI Q +P + + + D W+K F +DY
Sbjct: 2 ASTATQNASTRY---SQIWIDQPASLPFQDSINLIKE------DKEKWKKEKTAFLIDYD 52
Query: 125 KLEG 114
EG
Sbjct: 53 WFEG 56
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 347 YLFYCFVGDVLQIAAAAELYNREWRY 270
+L CFV D Q A AAEL W Y
Sbjct: 1382 FLKRCFVSDPNQRATAAELLMDPWVY 1407
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 385 LYDSEDIKKIYYSICSTVSLVTFYKLRLQQSYTIANGD 272
L+ + + + Y+S+ TVSL+ +K+R Q TI G+
Sbjct: 81 LFMGDYVDRGYHSV-ETVSLLIAFKIRYPQRITILRGN 117
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 720 QTLHTHPDKTRKRDTDFS*RQSNKHT 643
+T HT+P + R+RD S ++ N+ T
Sbjct: 884 KTQHTNPQENRRRDKGGSVKRRNERT 909
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 259 RRCGSHKRPACQWSRRLQRTNAAPTTSSMRTI 164
R G HKR A + R + APTT + TI
Sbjct: 490 RESGQHKRMASLTNSREMQIQHAPTTFAAETI 521
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,109,134
Number of Sequences: 5004
Number of extensions: 68354
Number of successful extensions: 201
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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