Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O14
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...   152   2e-37
AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ...    29   2.8  

>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
           protein Y110A7A.8 protein.
          Length = 504

 Score =  152 bits (369), Expect = 2e-37
 Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 2/221 (0%)
 Frame = -1

Query: 709 GSFILHKXXQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENTEKKLDKL 530
           G    H+  Q   P+L+ KAAK+++ K+TL AR+DA HES++G  G +     E K +K+
Sbjct: 281 GFIYFHQLVQKMPPDLKNKAAKILAAKVTLVARIDAQHESSNGEKGAEFLALVESKFEKM 340

Query: 529 QEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFADIEDDACQED 350
            E            P++++              R  MT+ RK+ANR+NF ++ +D  QE 
Sbjct: 341 LEPPPVKANKALPKPLDKASKKRGGRRTRKMKERLGMTDLRKSANRMNFGELGEDVMQEH 400

Query: 349 LGYTRGTI--GKSSTGRIRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRRQVSGTAS 176
           +G+  G +  G  + GRIR   +D+KT+ R+S+            GG TSIR +++GTAS
Sbjct: 401 MGFDIGQVKTGNVTGGRIRTAAVDQKTRARMSQKMMRQMERQKAAGGMTSIRSKMAGTAS 460

Query: 175 SVAFTPLQGLEIVNPQAAETRTNEGNAKYFSNTSGFLSVGK 53
           SV FTP+QGLEI+NP A E +     + YFS++  F+++ +
Sbjct: 461 SVTFTPIQGLEIINPAAQEQQQCSSTSNYFSSSGSFVNIDR 501


>AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical
           protein C35E7.5b protein.
          Length = 954

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = -1

Query: 202 RRQVSGTASSVAFTPL-----QGLEIVNPQAAETRTNEGNAKYFSNTSGFLSVGKKSD*I 38
           R  ++   S +A TPL     +G E+++ Q       +GN +YF N  G +S  + ++  
Sbjct: 159 RHYLNQQISKLAGTPLPYQDRKGKELISLQVTWLNKEQGNMEYFVNPDGNISKYQWNEKF 218

Query: 37  KYF 29
           +YF
Sbjct: 219 QYF 221


>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
           protein C35E7.5a protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = -1

Query: 202 RRQVSGTASSVAFTPL-----QGLEIVNPQAAETRTNEGNAKYFSNTSGFLSVGKKSD*I 38
           R  ++   S +A TPL     +G E+++ Q       +GN +YF N  G +S  + ++  
Sbjct: 159 RHYLNQQISKLAGTPLPYQDRKGKELISLQVTWLNKEQGNMEYFVNPDGNISKYQWNEKF 218

Query: 37  KYF 29
           +YF
Sbjct: 219 QYF 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,199,968
Number of Sequences: 27780
Number of extensions: 224806
Number of successful extensions: 648
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)