Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O09
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0216 - 1717696-1718265,1718856-1720082,1720558-1720627,172... 31 0.79
12_02_1113 - 26165074-26165889,26166077-26166202,26166294-261664... 29 3.2
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 29 5.6
06_01_1077 - 8796951-8797097,8797185-8797442,8797541-8797812,879... 29 5.6
01_06_1033 + 33955883-33956374 29 5.6
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 29 5.6
12_01_0340 - 2605770-2605916,2606353-2606595,2607260-2607531,260... 28 7.4
12_01_0119 + 905916-907277,907737-907774,908269-908492,909411-90... 28 7.4
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 28 7.4
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 28 7.4
01_05_0656 + 24011784-24011844,24012737-24012862,24014761-24016052 28 7.4
09_02_0216 + 5864127-5864236,5864962-5865062,5865985-5866046,586... 28 9.7
04_04_1290 + 32399905-32399972,32400502-32400571,32400950-324017... 28 9.7
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 28 9.7
03_02_0816 + 11487811-11488708,11488835-11489235 28 9.7
01_06_0784 + 31979670-31979976,31980092-31980337,31980428-319805... 28 9.7
>08_01_0216 -
1717696-1718265,1718856-1720082,1720558-1720627,
1721579-1721602,1722073-1722140
Length = 652
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -1
Query: 693 KMLLLVTVRRKRPKWRCSSREEQTLRQRHTELGEKCSDLQRE 568
+++ ++ + RP W +SRE Q LR+ + ++ +DL++E
Sbjct: 535 QLIPTISGEQYRPGWPLASRENQALREGMDNMKQRVADLEKE 576
>12_02_1113 -
26165074-26165889,26166077-26166202,26166294-26166457,
26166539-26166576,26166670-26166885,26166984-26167145,
26167212-26167497,26167585-26167761,26167864-26167971,
26168076-26168175,26168283-26168359,26168608-26168803,
26169032-26169363,26169476-26169589,26169651-26169753
Length = 1004
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -3
Query: 739 TRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLKGGADPAPASHRTRGEVL*PPKRDSL 560
T S++ S E+ N A + K V L GGA PA+ RG ++ P+R+SL
Sbjct: 814 TYSINHLMSMSSEKENNPAGGAQPTKARRVS--LCGGAHQQPAAPPRRGSLIPLPRRNSL 871
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 721 RRSRKKEQNKNAATRYRQKKKA 656
++SRK N+ A +YRQKKKA
Sbjct: 599 KKSRKPLGNREAVRKYRQKKKA 620
>06_01_1077 -
8796951-8797097,8797185-8797442,8797541-8797812,
8797907-8797967,8798082-8798159,8798380-8798439,
8798543-8798629,8798717-8798941,8799003-8799091,
8799137-8799251
Length = 463
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 742 KTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVL 641
K R D + R+ QN+ AA + R +KKA ++ L
Sbjct: 165 KERRGDQKMQRRLAQNREAARKSRMRKKAYIQQL 198
>01_06_1033 + 33955883-33956374
Length = 163
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 727 DXRRSRKKEQNKNAATRYRQKKKAEVEVL 641
+ R++RK N+ A +YR+KKKA L
Sbjct: 11 ELRKTRKPLGNREAVRKYREKKKAHAAFL 39
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 564 ESLFGGQSTSPRVRCDAGAGSAPP 635
E LFGGQ+TSP ++ G G P
Sbjct: 444 EQLFGGQTTSPYLQRAIGGGGVAP 467
>12_01_0340 -
2605770-2605916,2606353-2606595,2607260-2607531,
2607691-2607733,2607822-2607899,2608026-2608085,
2608272-2608331,2609440-2609577,2609655-2609767,
2610333-2610569,2610867-2610918
Length = 480
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 739 TRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVL 641
T+++D + R+ QN+ AA + R +KKA ++ L
Sbjct: 194 TKTLDPKIMRRLAQNREAARKSRLRKKAYIQQL 226
>12_01_0119 +
905916-907277,907737-907774,908269-908492,909411-909637,
909733-909980,910275-910557,910707-911135
Length = 936
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 354 LSEQIRCHIIEQHKLRHHQRDTNNTL 277
L EQ+R I++ K +HH +D++N+L
Sbjct: 714 LDEQVRLLILDVAKEQHHYQDSHNSL 739
>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 354 LSEQIRCHIIEQHKLRHHQRDTNNTL 277
L EQ+R I++ K +HH +D++N+L
Sbjct: 1256 LDEQVRLLILDVAKEQHHYQDSHNSL 1281
>07_03_1731 -
29102403-29102720,29103529-29103735,29103937-29105210,
29105298-29105734,29106370-29106764,29106921-29107051,
29109034-29109052
Length = 926
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 633 EEQTLRQRHTELGEKCSDLQREIRYLKA 550
EE+ LR R EL E+ QRE+ +L+A
Sbjct: 452 EEERLRDRVRELAEQNVSFQREVTFLEA 479
>01_05_0656 + 24011784-24011844,24012737-24012862,24014761-24016052
Length = 492
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 680 SLPSEEKGRSGGAPQGRSRPCASVTPNSGRSALTSKE 570
++PS G S R PC+ PNSG T +E
Sbjct: 64 TIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEE 100
>09_02_0216 +
5864127-5864236,5864962-5865062,5865985-5866046,
5866163-5866351,5866487-5866591,5866808-5866867,
5867636-5867713,5867881-5867938,5868286-5868554,
5872243-5872473,5872543-5872554
Length = 424
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 736 RSVDXRRSRKKEQNKNAATRYRQKKKAEVEVL 641
R++D + R+ QN+ AA + R +KKA ++ L
Sbjct: 184 RTLDPKTLRRLAQNREAARKSRLRKKAYIQQL 215
>04_04_1290 +
32399905-32399972,32400502-32400571,32400950-32401734,
32403068-32403674
Length = 509
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 621 LRQRHTELGEKCSDLQREIRYL---KALMRDLFKAKGL 517
+RQR EL E+CS ++ EI + K + LF+ GL
Sbjct: 440 IRQRVVELEEECSSMREEIHRIGKPKGALSRLFRKLGL 477
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -1
Query: 705 RSKIKMLLLVTVRRKRPKWRCS----SREEQTLRQRHTELGEKCSDLQREIRYLKA 550
+S ++ L + + R+ W EEQ LR+R EL E+ QRE+ L++
Sbjct: 384 KSDVQSTLEMELDRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLES 439
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 580 PPKRDSLPKGSDA*SFQGEGSNQVNQSTTPPPEK 479
PP ++ KGSD ++ +GS V+ S +P P+K
Sbjct: 206 PPTPEATGKGSDN-RWKDDGSRDVDPSPSPTPQK 238
>01_06_0784 +
31979670-31979976,31980092-31980337,31980428-31980544,
31980638-31980792,31980910-31980984,31981080-31981346,
31981436-31981756,31981858-31982271
Length = 633
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = -3
Query: 691 NAATRYRQKKKAEVEVLLKGGADPAPASHRTRGEVL*PPKRDSLPKGSDA*SFQGEGSNQ 512
NA R+K K E D A H+ GEV P K P G F + +
Sbjct: 526 NADDHAREKAKKEAPPAPAMANDAAEHHHQQAGEVDAPCKMTGSPNGRTLLDFMDDWNGD 585
Query: 511 VNQSTTPPPE 482
++ + PE
Sbjct: 586 ADRPSPTAPE 595
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,334,218
Number of Sequences: 37544
Number of extensions: 337383
Number of successful extensions: 1011
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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