BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O09
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical... 35 0.076
Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 6.6
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 6.6
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 6.6
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog p... 28 8.8
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 721 RRSRKKEQNKNAATRYRQKKKAEVE 647
++ RKK QN+ AATRYR+KK+ E E
Sbjct: 140 KKERKKAQNRLAATRYREKKRREKE 164
>AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical
protein W08E12.1 protein.
Length = 228
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 715 SRKKEQNKNAATRYRQKKKAEVEVLL 638
SRK++QNK AA RYR K+KA+ + LL
Sbjct: 165 SRKRQQNKVAAARYRDKQKAKWQDLL 190
>Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical
protein ZC376.7c protein.
Length = 474
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 733 SVDXRRSRKKEQNKNAATRYRQKKKAE 653
SVD R++ N+ AA RYR+KK+AE
Sbjct: 404 SVDEETDRRRMLNRIAAVRYREKKRAE 430
>Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical
protein ZC376.7b protein.
Length = 472
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 733 SVDXRRSRKKEQNKNAATRYRQKKKAE 653
SVD R++ N+ AA RYR+KK+AE
Sbjct: 402 SVDEETDRRRMLNRIAAVRYREKKRAE 428
>Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical
protein ZC376.7a protein.
Length = 488
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 733 SVDXRRSRKKEQNKNAATRYRQKKKAE 653
SVD R++ N+ AA RYR+KK+AE
Sbjct: 418 SVDEETDRRRMLNRIAAVRYREKKRAE 444
>Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical
protein C07G2.2c protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 727 DXRRSRKKEQNKNAATRYRQKKKAE 653
D RR+ E+NK AA RYR++KK E
Sbjct: 391 DERRNTILERNKAAAVRYRKRKKEE 415
>Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical
protein C07G2.2b protein.
Length = 460
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 727 DXRRSRKKEQNKNAATRYRQKKKAE 653
D RR+ E+NK AA RYR++KK E
Sbjct: 342 DERRNTILERNKAAAVRYRKRKKEE 366
>Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical
protein C07G2.2a protein.
Length = 457
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 727 DXRRSRKKEQNKNAATRYRQKKKAE 653
D RR+ E+NK AA RYR++KK E
Sbjct: 342 DERRNTILERNKAAAVRYRKRKKEE 366
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 813 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 850
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 1104 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 1141
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 1119 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 1156
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 1119 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 1156
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 813 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 850
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 1104 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 1141
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 1119 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 1156
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 748 RLKTRSVDXRRSRKKEQNKNAATRYRQKKKAEVEVLLK 635
RL+ + +R +KKE+++ + + +KKAE E L K
Sbjct: 1119 RLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKK 1156
>Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical
protein W08D2.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -1
Query: 663 KRPKWRCSSREEQTLRQRHTE----LGEKCSDLQREIRYLKALM 544
K +W CSSR+E T RH + LG+ +E +L A+M
Sbjct: 104 KFERWNCSSRDEVT-ETRHGKFQDILGKTLRSANKEAAFLNAIM 146
>AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog
protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -1
Query: 663 KRPKWRCSSREEQTLRQRHTE----LGEKCSDLQREIRYLKALM 544
K +W CSSR+E T RH + LG+ +E +L A+M
Sbjct: 104 KFERWNCSSRDEVT-ETRHGKFQDILGKTLRSANKEAAFLNAIM 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,567
Number of Sequences: 27780
Number of extensions: 297153
Number of successful extensions: 894
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -