Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_O08
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49793-1|AAB57632.1| 877|Drosophila melanogaster transcriptiona... 31 1.6
BT001565-1|AAN71320.1| 877|Drosophila melanogaster RE16782p pro... 31 1.6
AE014297-993|AAF54419.2| 877|Drosophila melanogaster CG9495-PA ... 31 1.6
AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD... 31 2.2
AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB... 31 2.2
AY069417-1|AAL39562.1| 661|Drosophila melanogaster LD11247p pro... 29 6.6
AE014296-537|AAF47706.3| 661|Drosophila melanogaster CG32484-PA... 29 6.6
BT004477-1|AAO42641.1| 1108|Drosophila melanogaster LP07504p pro... 29 8.8
BT003233-1|AAO24988.1| 1108|Drosophila melanogaster LP06548p pro... 29 8.8
AE014297-2975|AAF55880.4| 1108|Drosophila melanogaster CG16791-P... 29 8.8
>U49793-1|AAB57632.1| 877|Drosophila melanogaster transcriptional
repressor protein protein.
Length = 877
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 634 ASAAGTRRTPSSSVHHAPAQCIHVTERGRPARRGSC-WC 521
AS+ T +P S+ A Q +RGRPA+R +C WC
Sbjct: 32 ASSTSTSASPGSTTSPASTQ----RQRGRPAKRATCTWC 66
>BT001565-1|AAN71320.1| 877|Drosophila melanogaster RE16782p
protein.
Length = 877
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 634 ASAAGTRRTPSSSVHHAPAQCIHVTERGRPARRGSC-WC 521
AS+ T +P S+ A Q +RGRPA+R +C WC
Sbjct: 32 ASSTSTSASPGSTTSPASTQ----RQRGRPAKRATCTWC 66
>AE014297-993|AAF54419.2| 877|Drosophila melanogaster CG9495-PA
protein.
Length = 877
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 634 ASAAGTRRTPSSSVHHAPAQCIHVTERGRPARRGSC-WC 521
AS+ T +P S+ A Q +RGRPA+R +C WC
Sbjct: 32 ASSTSTSASPGSTTSPASTQ----RQRGRPAKRATCTWC 66
>AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD,
isoform D protein.
Length = 1851
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 56 CSQHCNLEPTFSTDNNINPIQRKKIWTIITNHDRTSNSFSKKA 184
CS +C + ST+NN N QR I +N+ +SNS S K+
Sbjct: 327 CSINCTYSHSHSTNNNCNARQRNSS-NISSNNTISSNSSSSKS 368
>AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB,
isoform B protein.
Length = 2197
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 56 CSQHCNLEPTFSTDNNINPIQRKKIWTIITNHDRTSNSFSKKA 184
CS +C + ST+NN N QR I +N+ +SNS S K+
Sbjct: 673 CSINCTYSHSHSTNNNCNARQRNSS-NISSNNTISSNSSSSKS 714
>AY069417-1|AAL39562.1| 661|Drosophila melanogaster LD11247p
protein.
Length = 661
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 580 AQCIHVTERGRPARRGSCWCTTRAPSGPALPAS 482
A+C+ + R A G+C C++ P+ PA+ AS
Sbjct: 82 ARCMRPKKSRRLAMSGACACSSGNPNSPAISAS 114
>AE014296-537|AAF47706.3| 661|Drosophila melanogaster CG32484-PA
protein.
Length = 661
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 580 AQCIHVTERGRPARRGSCWCTTRAPSGPALPAS 482
A+C+ + R A G+C C++ P+ PA+ AS
Sbjct: 82 ARCMRPKKSRRLAMSGACACSSGNPNSPAISAS 114
>BT004477-1|AAO42641.1| 1108|Drosophila melanogaster LP07504p protein.
Length = 1108
Score = 28.7 bits (61), Expect = 8.8
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = -2
Query: 644 RSASLGCGHAQDSIEFRSPCS---STVYTCHGAWQAGSKGFVLVYDARAVRPRASCLVYT 474
R +GC A++ I+ CS Y+CHG+W S +++ + CL Y
Sbjct: 984 RQLWVGCT-AENLIDVSPLCSVDGEEEYSCHGSWSENSTFYIIARHKGS--KHGVCLTY- 1039
Query: 473 APSTNDTRAGTVQQLSLSVMSHSCDRSVQPGVARDKAYNLTLNGTCEQS 327
P+ GT +L V+ +C R Q NL++ G C ++
Sbjct: 1040 RPT-----EGTAAKL---VVGDACYRGTQKPPDHHLEANLSVLGKCGET 1080
>BT003233-1|AAO24988.1| 1108|Drosophila melanogaster LP06548p protein.
Length = 1108
Score = 28.7 bits (61), Expect = 8.8
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = -2
Query: 644 RSASLGCGHAQDSIEFRSPCS---STVYTCHGAWQAGSKGFVLVYDARAVRPRASCLVYT 474
R +GC A++ I+ CS Y+CHG+W S +++ + CL Y
Sbjct: 984 RQLWVGCT-AENLIDVSPLCSVDGEEEYSCHGSWSENSTFYIIARHKGS--KHGVCLTY- 1039
Query: 473 APSTNDTRAGTVQQLSLSVMSHSCDRSVQPGVARDKAYNLTLNGTCEQS 327
P+ GT +L V+ +C R Q NL++ G C ++
Sbjct: 1040 RPT-----EGTAAKL---VVGDACYRGTQKPPDHHLEANLSVLGKCGET 1080
>AE014297-2975|AAF55880.4| 1108|Drosophila melanogaster CG16791-PA
protein.
Length = 1108
Score = 28.7 bits (61), Expect = 8.8
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = -2
Query: 644 RSASLGCGHAQDSIEFRSPCS---STVYTCHGAWQAGSKGFVLVYDARAVRPRASCLVYT 474
R +GC A++ I+ CS Y+CHG+W S +++ + CL Y
Sbjct: 984 RQLWVGCT-AENLIDVSPLCSVDGEEEYSCHGSWSENSTFYIIARHKGS--KHGVCLTY- 1039
Query: 473 APSTNDTRAGTVQQLSLSVMSHSCDRSVQPGVARDKAYNLTLNGTCEQS 327
P+ GT +L V+ +C R Q NL++ G C ++
Sbjct: 1040 RPT-----EGTAAKL---VVGDACYRGTQKPPDHHLEANLSVLGKCGET 1080
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,376,079
Number of Sequences: 53049
Number of extensions: 587937
Number of successful extensions: 1538
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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