Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O07
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0815 - 6513345-6513557,6513656-6513838,6513932-6514333           29   4.0  
12_02_0690 - 22168299-22168393,22168478-22168640,22168716-221689...    28   7.0  
10_07_0182 - 13887932-13888402                                         28   7.0  
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173...    28   9.3  

>07_01_0815 - 6513345-6513557,6513656-6513838,6513932-6514333
          Length = 265

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 470 CLWATITTHLSHKKKTNKNQNVISDKTT*NDKIQQVLLLYF--FLCSIRSTRT 622
           C WAT TT   HK+   K  + +S K   NDKI + + L    F  + + TR+
Sbjct: 182 CTWATTTTDSIHKEA--KTIDALSKKLAANDKILENINLKLDGFASAFQMTRS 232


>12_02_0690 -
           22168299-22168393,22168478-22168640,22168716-22168913,
           22169080-22169240,22169341-22169828,22169954-22170012,
           22170301-22170418,22170519-22170628
          Length = 463

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/69 (23%), Positives = 30/69 (43%)
 Frame = -3

Query: 303 KLFKIAFKLFAGSWYVYLLYFSQCDCWSHLVLLHAIGIALS*MMTSLYKIVPYLCRINLK 124
           KLF+   K+   +W   + +   C+    L L    G  +     ++Y++V      + K
Sbjct: 309 KLFQTFSKMSQAAWKTIISHAMTCEVGDDLCLYEVKGNNVGLFFDAIYQLVGVKFGDSYK 368

Query: 123 PLNTLYRIQ 97
           P+N L  I+
Sbjct: 369 PINELDEIE 377


>10_07_0182 - 13887932-13888402
          Length = 156

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 GQGGQVRCCGCTVQTETLELISQGVW 451
           G GG  RCC    +TE  +L S G W
Sbjct: 130 GGGGGQRCCAIVAETEGDDLGSDGDW 155


>10_08_1021 -
           22315487-22315493,22317051-22317154,22317227-22317328,
           22317623-22317745,22318038-22318094,22318498-22318758,
           22318948-22319377,22320168-22320286,22320515-22320595
          Length = 427

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 395 CCGCTVQTETLELISQGVWWHLRCSCLWATITTHLSHKKKTN 520
           C  C  +  T   ++ GV+  + CS +  ++  H+S  + TN
Sbjct: 29  CFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTN 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,108,581
Number of Sequences: 37544
Number of extensions: 260185
Number of successful extensions: 472
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)