Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_O07
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024812-7|AAF59548.2|  419|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF016443-7|AAK68184.1|  285|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF016443-6|AAK68185.1|  257|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z77661-9|CAI46604.1|  345|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>AC024812-7|AAF59548.2|  419|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.8 protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 392 RCCGCTVQTETLELISQGVW 451
           RCC CTV+ +T+E +   +W
Sbjct: 9   RCCECTVEEQTMEHLESHIW 28


>AF016443-7|AAK68184.1|  285|Caenorhabditis elegans Hypothetical
           protein C17E7.9a protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 256 LPAILFSM*LLVTFGIAACNWYCSLLNDDVIV 161
           L  +L  + ++VTF IA C   CSL N +++V
Sbjct: 198 LGKMLLIIWIIVTFAIAFCVMTCSLWNSEILV 229


>AF016443-6|AAK68185.1|  257|Caenorhabditis elegans Hypothetical
           protein C17E7.9b protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 256 LPAILFSM*LLVTFGIAACNWYCSLLNDDVIV 161
           L  +L  + ++VTF IA C   CSL N +++V
Sbjct: 170 LGKMLLIIWIIVTFAIAFCVMTCSLWNSEILV 201


>Z77661-9|CAI46604.1|  345|Caenorhabditis elegans Hypothetical
           protein F40G12.15 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 211 IAACNWYCSLLNDDVIVQNSALSL 140
           +  C WYCS L   ++V N +L L
Sbjct: 116 VGKCFWYCSCLTTIILVTNRSLDL 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,773,489
Number of Sequences: 27780
Number of extensions: 251932
Number of successful extensions: 507
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)