Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N22
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.20 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.80 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   7.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = -2

Query: 779 QNPVXS*XGPYPXPY--PRCEARXGPPSRCPSTGPYP 675
           Q P     GP P P+  P+   R  PP+  PS GP P
Sbjct: 14  QQPSSGAPGPQPSPHQSPQAPQRGSPPN--PSQGPPP 48


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 77  LKTRNGNLLYHYVHVHLSAY 136
           +K RNG L+Y+ +  H++AY
Sbjct: 749 MKRRNGALIYNILPPHVAAY 768


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 164 LKDSGSNFADGPAVLG-EIFINNFDSYE 244
           ++ SG N  DGPAV+   IF+ +    +
Sbjct: 47  IRPSGENATDGPAVVRVNIFVRSISKID 74


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 607 SGLPRPCSC 581
           SGLP PC C
Sbjct: 473 SGLPEPCRC 481


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 607 SGLPRPCSC 581
           SGLP PC C
Sbjct: 473 SGLPEPCRC 481


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 164 LKDSGSNFADGPAVL 208
           ++ SG N  DGPA++
Sbjct: 47  IRPSGENATDGPAIV 61


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 149 LFMSCMQRDARVRSDIKGYHF 87
           + +S + R+ RVRSD+K   F
Sbjct: 500 IVLSTILRNFRVRSDVKESEF 520


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,007
Number of Sequences: 438
Number of extensions: 4017
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)