Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_N21
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133... 34 0.11
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 33 0.20
03_05_0185 + 21713500-21714291 33 0.20
09_02_0397 - 8549273-8549380,8549718-8549765,8549875-8549964,855... 30 1.9
06_03_0028 + 15659824-15661266 30 2.5
08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195 29 4.3
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851... 29 5.7
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 29 5.7
05_07_0143 + 28000038-28000211,28002217-28002230,28002713-280027... 29 5.7
01_06_0677 - 31104736-31104897,31105046-31105234,31105313-311054... 29 5.7
01_06_0068 + 26163623-26163740,26163749-26165274 29 5.7
01_05_0050 + 17579872-17580103,17580206-17580262,17581178-175814... 28 7.5
09_06_0223 + 21659549-21659729,21659888-21659979 28 9.9
06_01_0739 + 5468642-5468857,5468978-5469051,5469651-5470083 28 9.9
>01_06_0042 -
25911662-25911736,25912409-25912607,25913275-25913348,
25913431-25913580,25913666-25913821,25915378-25915464,
25915706-25915765,25915878-25916414,25917292-25917585
Length = 543
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 531 RQDGQVPGEDEGGPGDASR---REPQTE*TEENAIQKGQEEEGEVRQAGR 391
R G+ P +D GGPGD R R P+ E+ + + +EG+ + R
Sbjct: 16 RAHGEAPADDRGGPGDEDRGGHRHPERAGEEQERAEDDKRDEGDGERDAR 65
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 510 GEDEGGPGDASRREPQTE*TEENAIQKGQEEEGEVRQAGRRPGGR 376
GE + GP RR P + +G EE E R+ RRPG R
Sbjct: 386 GERQPGPRREGRRRPPLAAAHDEPAVRGAAEEAEPRRRRRRPGER 430
>03_05_0185 + 21713500-21714291
Length = 263
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 507 EDEGGPGDASRREPQTE*TEENAIQKGQEEEGEVRQAGRRPGGRLG 370
ED+GG G + R++ T+ + + EEE +V GR PG R G
Sbjct: 137 EDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTPGCRAG 182
>09_02_0397 -
8549273-8549380,8549718-8549765,8549875-8549964,
8550479-8550562,8551119-8551280,8551729-8551781,
8552763-8552807,8553840-8553876,8554212-8554320,
8554391-8554818,8554939-8555085
Length = 436
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -1
Query: 642 YKDHEHGSSRGGVTGPYASRRXRFQHAA*SLEHTEQTRQDGQVPGEDEGGPGDASRRE 469
++ E S GG +AS+R + AA EH + + G DE GDASR+E
Sbjct: 72 HQKREATSDNGGGDEEWASKRPKVVGAAAEKEHILTSDASHETNG-DEAQGGDASRKE 128
>06_03_0028 + 15659824-15661266
Length = 480
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 321 RLRFQRRILTVDHLVLTIGIC*SSINLRYIFYTSNHLTPGGL 196
R RF R ++ + ++ + IC S +L + FYT++ L PGGL
Sbjct: 8 RCRFTRLVVAMQLVMGVLVICISMASL-HRFYTTDALLPGGL 48
>08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195
Length = 837
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 595 WSGNTAATGPVLVIFIGSIXVESVFSEXTMSVSMASKXLMXNSFAMEATIWG 750
WS NTA T V V G + +E + +M + MA + + +A E + G
Sbjct: 679 WSKNTAITVKVDVYSFGVMLLEIISCRKSMELKMAGEECNISEWAYEYVVSG 730
>10_05_0046 +
8516043-8516425,8517908-8518019,8518276-8518377,
8518605-8518657,8518976-8519062,8519162-8519830,
8520154-8520214,8520295-8520342
Length = 504
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 510 GEDEGGPGDASRREPQTE*TEENAIQKGQEEEGEVRQAGRRPGGRLGERYID 355
GE+E P A E E EE +++ +EEE + R G E + D
Sbjct: 10 GEEEEAPAAAGEEEAPVEMDEEGEMEEEEEEEQGEGEGEERDEGEEEEEWED 61
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 752 DPQXVASIAKEXXIXSFEAMETDIVNSLNTDSTXIEPIKITSTG 621
DP+ A A+E + ++ ++VN L+ DS I+ K+ G
Sbjct: 161 DPRLAALFAEENHLVGIDSPRDELVNWLDADSRLIKHRKVDKAG 204
>05_07_0143 +
28000038-28000211,28002217-28002230,28002713-28002788,
28003304-28003865,28004476-28004761,28004848-28005118,
28005478-28005633,28005871-28006368,28006809-28007093
Length = 773
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 698 AMETDIVNSLNTDSTXIEPIKITSTGPVAAVLPDHMQVDEXD 573
A+ T+ L+ + + P K+ P A ++PDH+QV D
Sbjct: 284 ALATENFQGLSLHNEELVPTKLAEDNP-AVIIPDHLQVTGSD 324
>01_06_0677 -
31104736-31104897,31105046-31105234,31105313-31105470,
31105558-31105648,31105787-31105961,31106065-31106204,
31106293-31106511,31106589-31106718,31107163-31107229,
31107347-31107441,31107535-31107606,31107681-31107736,
31107995-31108060,31108151-31108264,31108787-31109092
Length = 679
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 483 ASRREPQTE*TEENAIQKGQEEEGEVRQAGRRPGG 379
A R+EP+ ++G+EEE EV GR GG
Sbjct: 37 ARRKEPEVAVEAAPEAEEGREEEIEVADLGREGGG 71
>01_06_0068 + 26163623-26163740,26163749-26165274
Length = 547
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 442 IFLSLFCLRFPSRSISGSAFVFSWDL 519
+F L+C F S S+S +AF F+ D+
Sbjct: 16 LFFRLYCFSFVSNSLSFAAFAFACDI 41
>01_05_0050 +
17579872-17580103,17580206-17580262,17581178-17581413,
17581509-17581637,17581752-17581811,17582088-17582158,
17582568-17582673,17582753-17582791
Length = 309
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/68 (20%), Positives = 27/68 (39%)
Frame = -1
Query: 528 QDGQVPGEDEGGPGDASRREPQTE*TEENAIQKGQEEEGEVRQAGRRPGGRLGERYID*I 349
+ G G S REP E +++ QEE+ + + G G E ++ +
Sbjct: 14 KSGSSSSSSSSSSGSDSDREPAEEAAPTEEVEEQQEEQEDEQHVGEEDSGEEQEEELEPV 73
Query: 348 PERRRNNH 325
E+ + +
Sbjct: 74 VEQESSGY 81
>09_06_0223 + 21659549-21659729,21659888-21659979
Length = 90
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 510 GEDEGGPGDASRREPQTE*TEENAIQKGQEEEGEVRQAGRRPGG 379
GE EGG G RR+ T G++ EG+ Q GRR GG
Sbjct: 26 GEREGGVGVWQRRKRDTN-------GSGKDNEGKGGQHGRREGG 62
>06_01_0739 + 5468642-5468857,5468978-5469051,5469651-5470083
Length = 240
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 525 DGQVPGEDEGGPGDASRREP 466
D + PGE+ GG GDA R P
Sbjct: 80 DSKGPGEEHGGAGDAHRSVP 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,256,510
Number of Sequences: 37544
Number of extensions: 343008
Number of successful extensions: 903
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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