Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N21
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr...    31   0.72 
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ...    31   0.72 
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei...    31   0.72 
AF016674-4|AAB66130.1|  287|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
            W02B9.1b protein.
          Length = 2920

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/79 (22%), Positives = 38/79 (48%)
 Frame = -2

Query: 686  DIVNSLNTDSTXIEPIKITSTGPVAAVLPDHMQVDEXDSSMLPKALNIRNRLDKTGKSQE 507
            ++VN  + + T I+PI + +   +  V+ D   + E   S     LN+ ++  K  K Q 
Sbjct: 1036 ELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQT 1095

Query: 506  KTKADPEMLLEGNLKQNRL 450
                 P + ++ N++ N++
Sbjct: 1096 SPDCKPGITVDENVELNKV 1114


>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
            W02B9.1b protein.
          Length = 2920

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/79 (22%), Positives = 38/79 (48%)
 Frame = -2

Query: 686  DIVNSLNTDSTXIEPIKITSTGPVAAVLPDHMQVDEXDSSMLPKALNIRNRLDKTGKSQE 507
            ++VN  + + T I+PI + +   +  V+ D   + E   S     LN+ ++  K  K Q 
Sbjct: 1036 ELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQT 1095

Query: 506  KTKADPEMLLEGNLKQNRL 450
                 P + ++ N++ N++
Sbjct: 1096 SPDCKPGITVDENVELNKV 1114


>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
            protein W02B9.1b protein.
          Length = 2920

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/79 (22%), Positives = 38/79 (48%)
 Frame = -2

Query: 686  DIVNSLNTDSTXIEPIKITSTGPVAAVLPDHMQVDEXDSSMLPKALNIRNRLDKTGKSQE 507
            ++VN  + + T I+PI + +   +  V+ D   + E   S     LN+ ++  K  K Q 
Sbjct: 1036 ELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQT 1095

Query: 506  KTKADPEMLLEGNLKQNRL 450
                 P + ++ N++ N++
Sbjct: 1096 SPDCKPGITVDENVELNKV 1114


>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
            protein.
          Length = 2920

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/79 (22%), Positives = 38/79 (48%)
 Frame = -2

Query: 686  DIVNSLNTDSTXIEPIKITSTGPVAAVLPDHMQVDEXDSSMLPKALNIRNRLDKTGKSQE 507
            ++VN  + + T I+PI + +   +  V+ D   + E   S     LN+ ++  K  K Q 
Sbjct: 1036 ELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQT 1095

Query: 506  KTKADPEMLLEGNLKQNRL 450
                 P + ++ N++ N++
Sbjct: 1096 SPDCKPGITVDENVELNKV 1114


>AF016674-4|AAB66130.1|  287|Caenorhabditis elegans Hypothetical
           protein C03H5.3 protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 689 TDIVNSLNTDSTXIEPIKITSTGPVAAVLPDHMQVDEXDSSMLPKALNI-RNRLDKTGKS 513
           T I N  N+DS   EP++ TS  P  +V      +++       K+  +   +L K  K 
Sbjct: 157 TSIENPENSDSDDDEPMEATSKAPEMSVAEPKSIIEKLLEKKAEKSAKLAAKKLKKRSKK 216

Query: 512 QEKTK 498
           +E  K
Sbjct: 217 KEAKK 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,444,031
Number of Sequences: 27780
Number of extensions: 294889
Number of successful extensions: 708
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)