Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_N17
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 71 1e-12
03_01_0034 + 318432-318825,318902-319851 71 1e-12
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 71 1e-12
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 71 1e-12
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 70 2e-12
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 70 2e-12
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 70 2e-12
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 67 1e-11
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 31 1.1
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 31 1.1
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 31 1.1
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 30 2.5
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 562 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 605
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 794 MAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
MA TF+G + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 543 MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 590
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 425
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TFIG + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 403 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 446
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = -1
Query: 794 MAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
MA TFIG + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 384 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 431
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 425
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = -1
Query: 794 MAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
MA TFIG + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 363 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLV+EYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVAEYQQY 425
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TFIG + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLV+EYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVAEYQQY 425
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TF+G + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 362 KMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLV+EYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVAEYQQY 425
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TFIG + QE+F+R+ + + FL GMDEMEFTE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G AESNMNDLV+EYQQY
Sbjct: 398 SEQFTAMFRRKAFLHWYTSEG-MDEMEFTEAESNMNDLVAEYQQY 441
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -1
Query: 794 MAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
MA TF+G + QE+F+R+ + + FL + GMDEMEFTE
Sbjct: 379 MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHW-YTSEGMDEMEFTE 426
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 389 SRIDHKFDLMYAKRAFVHWYVGEG 412
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 389 SRIDHKFDLMYSKRAFVHWYVGEG 412
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 470 SRIDRKFDLMYAKRAFVHWYVGEG 493
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 29.9 bits (64), Expect = 2.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 394 KFDLMYSKRAFVHWYVGEG 412
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,376,020
Number of Sequences: 37544
Number of extensions: 304053
Number of successful extensions: 649
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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