Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_N17
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 71 1e-12
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 71 1e-12
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 71 1e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 71 1e-12
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 31 0.96
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 31 0.96
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 30 1.7
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 30 1.7
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 30 1.7
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 30 1.7
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 30 1.7
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 30 2.2
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 30 2.2
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 30 2.2
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 30 2.2
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 30 2.2
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 30 2.2
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 29 2.9
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 425
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KM+ TFIG A QELFKRI + + FL GMDEMEFTE
Sbjct: 362 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 425
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TF+G A QELFKRI + + FL GMDEMEFTE
Sbjct: 362 KMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 425
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KM+ TFIG A QELFKRI + + FL GMDEMEFTE
Sbjct: 362 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/45 (75%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLVSEYQQY 425
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KM+ TFIG A QELFKRI + + FL GMDEMEFTE
Sbjct: 362 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDL+SEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLISEYQQY 425
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TF+G A QELFKRI + + FL GMDEMEFTE
Sbjct: 362 KMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
SEQFTAMFRRKAFLHWY G G AESNMNDL+SEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEG-MDEMEFTEAESNMNDLISEYQQY 425
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -1
Query: 797 KMAXTFIGTPPAXQELFKRILGTVYRYVQAQGFLALVXRARGMDEMEFTE 648
KMA TF+G A QELFKRI + + FL GMDEMEFTE
Sbjct: 362 KMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHW-YTGEGMDEMEFTE 410
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
S+QF +FRRKAFLHWY AE+ +NDL+SE+QQY
Sbjct: 380 SKQFAGLFRRKAFLHWY----TMEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = -2
Query: 736 SEQFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQY 602
S+QF +FRRKAFLHWY AE+ +NDL+SE+QQY
Sbjct: 380 SKQFAGLFRRKAFLHWY----TMEESEFTDAENKVNDLISEFQQY 420
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQ 605
+F M+ ++AF+HWY G G A +M L +Y++
Sbjct: 400 KFDLMYAKRAFVHWYVGEG-MEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQ 605
+F M+ ++AF+HWY G G A +M L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEG-MEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRGAWTRWSSPRAESNMNDLVSEYQQ 605
+F M+ ++AF+HWY G G A +M L +Y++
Sbjct: 372 KFDLMYAKRAFVHWYVGEG-MEEGEFSEAREDMAALEKDYEE 412
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 387 SRLDYKFDLMYAKRAFVHWYVGEG 410
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 387 SRLDYKFDLMYAKRAFVHWYVGEG 410
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 387 SRLDYKFDLMYAKRAFVHWYVGEG 410
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 387 SRLDYKFDLMYAKRAFVHWYVGEG 410
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 387 SRLDYKFDLMYAKRAFVHWYVGEG 410
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 387 SRLDYKFDLMYAKRAFVHWYVGEG 410
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 745 SAFSEQFTAMFRRKAFLHWYXGRG 674
S +F M+ ++AF+HWY G G
Sbjct: 24 SRLDYKFDLMYAKRAFVHWYVGEG 47
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 389 KFDLMYAKRAFVHWYVGEG 407
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 394 KFDLMYAKRAFVHWYVGEG 412
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 399 KFDLMYAKRAFVHWYVGEG 417
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 393 KFDLMYAKRAFVHWYVGEG 411
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 394 KFDLMYAKRAFVHWYVGEG 412
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HWY G G
Sbjct: 394 KFDLMYAKRAFVHWYVGEG 412
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 750 VQAHSRNSLPL--CSGARLSCIGTPGEGHGRDGVHRG 646
VQA S+ + C G +S I TPG+ H D H G
Sbjct: 1508 VQALDGQSIHMTPCGGGPISSISTPGDAHHHDDHHPG 1544
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 175 YLRCNFSSSFCNQCDELLAFSNE 107
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 730 QFTAMFRRKAFLHWYXGRG 674
+F M+ ++AF+HW+ G G
Sbjct: 397 KFDLMYSKRAFVHWFVGEG 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,995,956
Number of Sequences: 27780
Number of extensions: 267735
Number of successful extensions: 621
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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