Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N13
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    74   1e-13
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    71   1e-12
U13076-1|AAA96984.1|  463|Caenorhabditis elegans steroid hormone...    32   0.40 
Z36237-1|CAA85271.2|  619|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AY204167-1|AAO39171.1|  619|Caenorhabditis elegans nuclear recep...    31   1.2  
AF273770-1|AAG15119.1|  469|Caenorhabditis elegans nuclear recep...    31   1.2  
AF083224-1|AAD03682.1|  619|Caenorhabditis elegans nuclear recep...    31   1.2  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    31   1.2  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    29   2.9  
U41275-3|AAA82466.1|  612|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = -3

Query: 420 LKKIEIDMVPNPRCNSLLQRTRLGTRFRXH-DSFVCAGGQEGR-DTCQGDGGAPLACPIG 247
           L++I + ++    C+SL     +G   R H  S +CAG   G+ D+CQGD G PL C   
Sbjct: 196 LREIHVPLLSTLFCSSL--PNYIG---RIHLPSMLCAGYSYGKIDSCQGDSGGPLMCA-R 249

Query: 246 DSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMN 127
           D  ++L G+V+WGIGC +  +P VY NV    +W++ +MN
Sbjct: 250 DGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWINLEMN 289



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -2

Query: 583 DVALLXMXAPFNLAEHINMICLPD-PGDSFDTSKNCVANGWGKDVFG 446
           D A++ +  P N +     ICLP  P      ++ CV  GWG  + G
Sbjct: 145 DFAIMRIHPPVNTSTTARPICLPSLPAVE---NRLCVVTGWGSTIEG 188


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = -3

Query: 327 SFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMR 151
           S  CAG  EG  D+CQGD G P AC   D  + LAG+++WG GC QK  P +Y  VA   
Sbjct: 194 SAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYL 253

Query: 150 SWVDRKMN 127
           SW+   +N
Sbjct: 254 SWISAIIN 261



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 586 NDVALLXMXAP-FNLAEHINMICLPDPGDSFDTSKNCVANGWG 461
           +D+A+L +  P     E+   ICLP     +   + CV +GWG
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWG 158


>U13076-1|AAA96984.1|  463|Caenorhabditis elegans steroid hormone
           receptor familymember CNR8 protein.
          Length = 463

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = +2

Query: 119 PHAFIFRSTQDLMRATLAXTAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 298
           PH   F  + D M   L  T  + F P   P + S       +      G  PSP   SL
Sbjct: 13  PHYNPFALSNDFMPNPLMPTFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 72

Query: 299 PSCPP 313
           P+ PP
Sbjct: 73  PTSPP 77


>Z36237-1|CAA85271.2|  619|Caenorhabditis elegans Hypothetical
           protein C48D5.1 protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 119 PHAFIFRSTQDLMRATLAXTAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 298
           PH   F  + D M   L  +  + F P   P + S       +      G  PSP   SL
Sbjct: 169 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 228

Query: 299 PSCPP 313
           P+ PP
Sbjct: 229 PTSPP 233


>AY204167-1|AAO39171.1|  619|Caenorhabditis elegans nuclear receptor
           NHR-6 protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 119 PHAFIFRSTQDLMRATLAXTAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 298
           PH   F  + D M   L  +  + F P   P + S       +      G  PSP   SL
Sbjct: 169 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 228

Query: 299 PSCPP 313
           P+ PP
Sbjct: 229 PTSPP 233


>AF273770-1|AAG15119.1|  469|Caenorhabditis elegans nuclear receptor
           NHR-6 protein.
          Length = 469

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 119 PHAFIFRSTQDLMRATLAXTAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 298
           PH   F  + D M   L  +  + F P   P + S       +      G  PSP   SL
Sbjct: 19  PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 78

Query: 299 PSCPP 313
           P+ PP
Sbjct: 79  PTSPP 83


>AF083224-1|AAD03682.1|  619|Caenorhabditis elegans nuclear receptor
           NHR-6 protein.
          Length = 619

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +2

Query: 119 PHAFIFRSTQDLMRATLAXTAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 298
           PH   F  + D M   L  +  + F P   P + S       +      G  PSP   SL
Sbjct: 169 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 228

Query: 299 PSCPP 313
           P+ PP
Sbjct: 229 PTSPP 233


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 330 DSFVCAGGQEGRDTCQGDGGAPLACPIGDS-RYKLAGLVAWGIGCGQ 193
           DSF C   +E ++ C GD G  L     DS R  +  +V++G  C Q
Sbjct: 257 DSF-CTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSDCVQ 302



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 586 NDVALLXMXAPFNLAEHINMICLPD-PGDSFDTSKNCVANGWGKD 455
           ND+ +L + +  +  E  N  CLP  P  +  +  N  + GWG D
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSD 220


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +2

Query: 158 RATLAXTAGTSFCPHPMPQATSPANL*-RLSPMGQARGA-PPSPWQVSLPSCPP 313
           RA  A        P P+P AT P+     ++P+     A PP+P Q S P  PP
Sbjct: 222 RAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPAPIQASAPLRPP 275


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +2

Query: 158 RATLAXTAGTSFCPHPMPQATSPANL*-RLSPMGQARGA-PPSPWQVSLPSCPP 313
           RA  A        P P+P AT P+     ++P+     A PP+P Q S P  PP
Sbjct: 222 RAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPAPIQASAPLRPP 275


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = -2

Query: 634 VEXIIIXEDF-NTKSLK-NDVALLXMXAPFNLAEHINMICLPDPGDSFDTSKNCVANGWG 461
           V  +++  +F ++  LK +D A++ +    + +E++  ICLP P   +  +K+    GWG
Sbjct: 125 VRAVLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPICLPRPNMYY--TKSLAVPGWG 182

Query: 460 KDVFGLQG 437
           + +F   G
Sbjct: 183 R-IFNESG 189


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
 Frame = -3

Query: 321 VCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIG-----CGQKDVPAVYANVAR 157
           +CAG      T  GD G PL     +  Y   G+ ++G         Q   P VY  +++
Sbjct: 215 ICAGAYL-HGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISK 273

Query: 156 MRSWV 142
              W+
Sbjct: 274 YVPWI 278


>U41275-3|AAA82466.1|  612|Caenorhabditis elegans Hypothetical
           protein T25D1.1 protein.
          Length = 612

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 556 PFNLAEHINMICLPDPGDSFDTSKNCVAN 470
           P NL E +    +P+ G S DT+K C AN
Sbjct: 320 PENLEETVAKTTIPNIGFSVDTAKKCDAN 348


>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
           protein T28F3.5 protein.
          Length = 1679

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 388 PSLQFAAAANQTWDQVPXARQFRVRRGTGGQG 293
           P+LQ+  A  +    +P  ++FR R  TG  G
Sbjct: 367 PALQYQIAMGRKLKDIPCIKRFREREATGNAG 398


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,495,116
Number of Sequences: 27780
Number of extensions: 344097
Number of successful extensions: 1134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)