Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N12
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical ...    33   0.23 
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    32   0.52 
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    32   0.52 
U23452-7|AAR12972.1|  366|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.10 protein.
          Length = 976

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -2

Query: 333 FCPVCRLNHRTTREAHNLTDTHRAMKRFLMPFCRICRTTYRSPMIYEHHICS 178
           FC +C LN  + +E     D   ++       C +C   + S  +YE HIC+
Sbjct: 526 FCALCDLNFFSQQEYRQHLDEQHSV------ICAVCNQKFSSRQVYEDHICN 571


>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 34  ILDFINITNRIKCHEIIQINIHALITT-TLSFWTRMA*RLVCFFLKMFERTYMMFIDHRR 210
           ILD ++    ++CH  I   I  L+   TLSF  +M     CF  K+ E    + ID+ R
Sbjct: 731 ILDQVSEMQSLECHRRITSRIEELMDLQTLSFAKQMTDE-ACFRNKLKEFPRRIDIDYLR 789

Query: 211 TICSATNSTE 240
           TI   T S E
Sbjct: 790 TIWGFTLSNE 799


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 34  ILDFINITNRIKCHEIIQINIHALITT-TLSFWTRMA*RLVCFFLKMFERTYMMFIDHRR 210
           ILD ++    ++CH  I   I  L+   TLSF  +M     CF  K+ E    + ID+ R
Sbjct: 731 ILDQVSEMQSLECHRRITSRIEELMDLQTLSFAKQMTDE-ACFRNKLKEFPRRIDIDYLR 789

Query: 211 TICSATNSTE 240
           TI   T S E
Sbjct: 790 TIWGFTLSNE 799


>U23452-7|AAR12972.1|  366|Caenorhabditis elegans Hypothetical
           protein R07G3.7a protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 297 REAHNLTDTHRA-MKRFLMPF-CRICRTTYRSPMIYEHHICSLEHLKKKANK 148
           R A NL   ++  +K  ++PF C  CR   R+ +  + H+C  E  +K A K
Sbjct: 55  RIAVNLVRKYKKQLKPRVLPFFCDHCRLASRTLLHIKEHVCDKEEKRKAARK 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,929,815
Number of Sequences: 27780
Number of extensions: 270384
Number of successful extensions: 779
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)