Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_N11
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.11
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.19
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 31 0.25
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 29 0.57
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 28 1.3
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 27 4.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 26 5.4
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 26 5.4
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 26 7.1
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 26 7.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 9.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 9.4
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.9 bits (69), Expect = 0.11
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
TS+ ++S A S Y+T L +S+ +T LS+ T + ++ P N+T AT ++
Sbjct: 512 TSTSVSSTAPS--YNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSAS-- 567
Query: 402 SSLFGKTTTSSS 367
S+ FG +T +SS
Sbjct: 568 STPFGNSTITSS 579
Score = 30.3 bits (65), Expect = 0.33
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
TSS ++S A SNS ++ +SS TT + T T ++ + ++TP T S
Sbjct: 209 TSSSLSSTAASNSATSSSLASSSLNSTT-------SATATSSSISSTVSSSTPLTSSNST 261
Query: 402 SSLFGKTTTSSS 367
++ + TSSS
Sbjct: 262 TAATSASATSSS 273
Score = 30.3 bits (65), Expect = 0.33
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
TS+ ++S A S Y+T L +S+ +T LS+ T + ++ P N+T AT ++
Sbjct: 398 TSTSVSSTAPS--YNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASST 455
Query: 402 --SSLFGKTTTSSS 367
SS+ T TS+S
Sbjct: 456 PLSSVNSTTATSAS 469
Score = 29.1 bits (62), Expect = 0.76
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = -3
Query: 555 NSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGDSSLFGKTTT 376
N++S S+ +SSA ++ S+ L + T + +++ + SA SSL +TT
Sbjct: 66 NTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTT 125
Query: 375 SSS 367
SSS
Sbjct: 126 SSS 128
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGE-MENTTPATESAG 406
TSS + +++NS ++ +SS T ++ S+ + + + T ++ + +++ A+ S
Sbjct: 86 TSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSIT 145
Query: 405 DSSLFGKTTTSSS 367
SSL +TTSSS
Sbjct: 146 SSSLASSSTTSSS 158
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
TSS ++S A SNS ++ +SS TT + +L+ T + T+ + S+
Sbjct: 177 TSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAAS----NSATSSSLASSSL 232
Query: 402 SSLFGKTTTSSS 367
+S T TSSS
Sbjct: 233 NSTTSATATSSS 244
Score = 25.8 bits (54), Expect = 7.1
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSAT-ITTKLSNWMLTLTGTKTA*PGEMENTTP----AT 418
+SS +S A S+S ++ L SS+T TT S +LT + ++T A+
Sbjct: 72 SSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLAS 131
Query: 417 ESAGDSSLFGKTTTSSS 367
S SSL + TSSS
Sbjct: 132 SSITSSSLASSSITSSS 148
Score = 25.8 bits (54), Expect = 7.1
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = -3
Query: 603 VARGPPRTSSKITSRANSNS-------YSTKRELNSSATITTKLSNWMLTLTGTKTA*PG 445
V+ P TSS T+ A S S Y+T L SS +T LS+ T + ++ P
Sbjct: 249 VSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPL 308
Query: 444 EMENTTPATESAGDSSLFGKTTTSSS 367
N+T T SA + L ++ +S+
Sbjct: 309 TSVNST-TTTSASSTPLSSVSSANST 333
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.19
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = -3
Query: 579 SSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGDS 400
SS +S ++S+ ST SS++ ++ +S+ T + T T+ ++ PA+ S+ S
Sbjct: 344 SSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTS--SSSSSSRPASSSSHSS 401
Query: 399 SLFGKTTTSSSR 364
SL ++SSS+
Sbjct: 402 SLSSHKSSSSSK 413
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATIT-TKLSNWMLTLTGTKTA*PGEMENTTPATE 415
P TSS S ++ S S+ +SS+T+T + LS + T + ++ +++ ++
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSS 261
Query: 414 SAGDSSLFGKTTTSSS 367
+A SS +SSS
Sbjct: 262 TASSSSSSSSIISSSS 277
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 30.7 bits (66), Expect = 0.25
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATES 412
P ++S + + +S S+ NSS T T SN +T TGT T T ++
Sbjct: 455 PFYSNSSVIPTSAPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTG----SATATSSSPY 510
Query: 411 AGDSSLFGKTTTSSS 367
+SS+ TT S+S
Sbjct: 511 YSNSSIIVPTTVSTS 525
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKT 457
P ++S + + +S S+ NSS T T SN +T TGT T
Sbjct: 347 PFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTSITYTGTGT 391
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKT 457
P ++S + + +S S+ NSS T T SN +T TGT T
Sbjct: 401 PFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGT 445
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -3
Query: 612 VQAVARGPPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTK-TA*PGEME 436
V + + P TSS + A S+S + + + T TT T+T T ++ P E
Sbjct: 528 VSSFSSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETI 587
Query: 435 NTTPATESAGDSSLFGKTTTSS 370
+T T + +S + TS+
Sbjct: 588 STVSTTSTVSESGSSSASITST 609
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 123 SRYSPTQGGPRYRSTFASSFRP 188
S+YS TQ PR ST A SF+P
Sbjct: 135 SKYSITQDSPRVSSTIAYSFKP 156
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 400 ISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWGSNDSSEKRHTWYLY 245
ISL +V + L + E+ L L++ ++RYG K W S D S ++ LY
Sbjct: 109 ISLKSEKDVFLQGLLSMDEIELLLEIFIERYG--KRWLSVDYSASQYMELLY 158
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -3
Query: 510 TITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGDSSLFGKTTTSSS 367
T+ ++ W+ T T P + +NT A+E+ S+ + T S
Sbjct: 58 TLACSVAAWLFWFTSLDTLEPDDRKNTLKASEAVSTSAKTSEETAKPS 105
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
+S+ + A+ ST +SAT ++ S + ++TG+ T+ T +T S
Sbjct: 1012 SSTSSVATASVTDSSTSSVATASATDSSTSSIAVASVTGSSTSSVATASATDSSTSSVAT 1071
Query: 402 SSLFGKTTTS 373
+S+ G ++S
Sbjct: 1072 ASITGSLSSS 1081
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 356 HRTRDVLETGRERGQIWRQEDL 291
H+ +D +E R+RG W ED+
Sbjct: 121 HKVKDCMERPRKRGARWTGEDI 142
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 554 IPTHTRPKEN*THRQPLQPSS 492
IP HT+PK + T P++P+S
Sbjct: 341 IPRHTKPKLSTTQSTPVKPAS 361
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 382 NNVIFKILNTEHEMYLKLDVNVDRY 308
N+V+F+ L E++ Y + N DR+
Sbjct: 207 NSVVFQYLKDENKFYFGVSANQDRF 231
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 25.8 bits (54), Expect = 7.1
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -3
Query: 555 NSNSYSTKRELNSSATITTKLSNWMLTLTGT-KTA*P---GEMENTTPATESAGDSSLFG 388
N++S +T S+ + + L+GT A P NTTP + G S FG
Sbjct: 229 NASSTNTTSAFGSTPAFGASTTPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFG 288
Query: 387 KTTTSS 370
TT++
Sbjct: 289 SNTTNT 294
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -3
Query: 579 SSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGT--KTA*PGEMENTTPATESAG 406
S+ T N S + S++ TT S+ +T + + +T+ P + +T T S+
Sbjct: 623 SNSNTGSLNGTSSFNVNSVGPSSSQTTPTSSSSITGSQSLKETSSPAYVSSTVSYTSSSV 682
Query: 405 DSSLFGKTTTSSS 367
DSS +T SSS
Sbjct: 683 DSSSTYNSTGSSS 695
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 76 PRLNYEAVVLGVVGDCPVIP--PHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSPGI 249
PRL G PV+ P P + P ++ P P S RPP+P +
Sbjct: 972 PRLATGGSTAAARGPRPVVQNKPAATKPVSMPAAKSKPAPMANPVSTAQQTQNRPPAPAM 1031
Query: 250 NTR 258
R
Sbjct: 1032 QAR 1034
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,004,577
Number of Sequences: 5004
Number of extensions: 65356
Number of successful extensions: 239
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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