Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_N11
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 33 0.18
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 33 0.18
U23521-4|AAC46816.4| 389|Caenorhabditis elegans Hypothetical pr... 33 0.31
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine re... 30 2.2
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 2.9
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 5.0
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.6
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 28 6.6
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 28 6.6
AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical ... 28 6.6
AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain pro... 28 6.6
AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein. 28 6.6
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 28 8.8
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATES 412
P + I + S Y+T +LNS+ T TT S T T + TTP+T
Sbjct: 1993 PQQALQMIYNFVKSRGYNTPFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPSTPG 2052
Query: 411 AGDSSLFGKTTT 376
AG + G T
Sbjct: 2053 AGTTGTPGTGPT 2064
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATES 412
P + I + S Y+T +LNS+ T TT S T T + TTP+T
Sbjct: 1993 PQQALQMIYNFVKSRGYNTPFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPSTPG 2052
Query: 411 AGDSSLFGKTTT 376
AG + G T
Sbjct: 2053 AGTTGTPGTGPT 2064
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -3
Query: 591 PPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATES 412
P + I + S Y+T +LNS+ T TT S T T + TTP+T
Sbjct: 1993 PQQALQMIYNFVKSRGYNTPFDLNSNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPSTPG 2052
Query: 411 AGDSSLFGKTTT 376
AG + G T
Sbjct: 2053 AGTTGTPGTGPT 2064
>U23521-4|AAC46816.4| 389|Caenorhabditis elegans Hypothetical
protein F41C3.11 protein.
Length = 389
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 541 LDQKRIKLIGNHYNQALK-LDANVDRYKDRLTWGDGKYYTSYRVSWRLISLWENNNVIFK 365
+D I + +++ +K + N+D YK WG +Y + L+ L NN+ F
Sbjct: 167 MDSSTCAAIKSQWDETIKCVSLNIDTYKTGYEWGKQEYINILTLRANLMDLLATNNIPFV 226
Query: 364 ILNTE 350
++ +
Sbjct: 227 LIEAD 231
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 115 GDCPVIPPHKAVPXTGP-RSRPASDPAGTPDSQ*GTAVGRPPSP 243
G P PP VP T P RS P P TP S PPSP
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = -3
Query: 618 VRVQAVARGPPRTSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEM 439
V + + G P+ S+ S A S S+ +S+T + T +GT + +
Sbjct: 1727 VSTSSASSGQPQMSTSQGSSAGSTVVSSTASPAASSTAPSSTGTMSSTSSGTVGSTMSQS 1786
Query: 438 ENTTPATESAGDSSLFGKTTTSSSR 364
T G + G ++TSS++
Sbjct: 1787 STAASTTSHTGSTVTLGSSSTSSNQ 1811
>AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine
receptor, class w protein103 protein.
Length = 368
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 249 KYQVCLFSLESFDPQVFLSPYLSTFTSSFKYISCSVFSILKMTLLFSQREMSR 407
++ V L + D Q L YL+ K+I C FSIL + LL + +++ +
Sbjct: 195 QFSVMLNDFFNSDDQFVLRSYLTVDAVVTKFIPCVAFSILTVLLLHALQKLKK 247
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -3
Query: 570 ITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKT--A*PGEMENTTPATESAGDSS 397
+TS S S + T T +LS+ TLT T+T P + TTP SA
Sbjct: 372 VTSIGTSTSPQAVVTTTGNPTTTAQLSSSSKTLTSTQTTQGSPSTVSQTTPGVSSAST-- 429
Query: 396 LFGKTTTSSS 367
G TT+ +S
Sbjct: 430 --GMTTSQAS 437
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
T+++ T+ +++ ST S++T+TT S +T T T ++ T +TES
Sbjct: 424 TTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 402 SSLFGKTTTSSS 367
S TT++++
Sbjct: 484 SPSSTVTTSTTA 495
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = -3
Query: 582 TSSKITSRANSNSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENTTPATESAGD 403
T+++ T+ +++ ST S++T+TT S +T T T ++ T +TES
Sbjct: 424 TTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 402 SSLFGKTTTSSS 367
S TT++++
Sbjct: 484 SPSSTVTTSTTA 495
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSPGINTR 258
PV+ + P TG + P G+P +Q V +P P T+
Sbjct: 564 PVVTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQ 608
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 118 DCPVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSP 243
DCP PP P P + S G P G+A+ PP P
Sbjct: 207 DCPAGPPG---PSGAPGQKGPSGAPGAPGQSGGSALPGPPGP 245
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 118 DCPVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSP 243
DCP PP P P + S G P G A+ PP P
Sbjct: 172 DCPAGPPG---PSGAPGQKGPSGAPGAPGQSGGAALPGPPGP 210
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 118 DCPVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSP 243
DCP PP P P + S G P G A+ PP P
Sbjct: 172 DCPAGPPG---PSGAPGQKGPSGAPGAPGQSGGAALPGPPGP 210
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 121 CPVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSP 243
CP PP P P PAG+P G PP P
Sbjct: 165 CPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGP 205
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 118 DCPVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSP 243
DCP PP P P + S G P G A+ PP P
Sbjct: 172 DCPAGPPG---PSGAPGQKGPSGAPGAPGQSGGAALPGPPGP 210
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 118 DCPVIPPHKAVPXTGPRSRPASDPAGTPDSQ*GTAVGRPPSP 243
DCP PP P P + S G P G A+ PP P
Sbjct: 172 DCPAGPPG---PSGAPGQKGPSGAPGAPGQSGGAALPGPPGP 210
>AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical
protein Y106G6E.5 protein.
Length = 731
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 383 QQRHLQDTEHRTRDVLETGRERG--QIWRQEDLGIE*FQ 273
++R +QD E + D LET R +IWR+E LG E Q
Sbjct: 486 KRREIQDVEELSAD-LETFSYRAMQEIWREEQLGKENIQ 523
>AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain
protein CED-12 protein.
Length = 731
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 383 QQRHLQDTEHRTRDVLETGRERG--QIWRQEDLGIE*FQ 273
++R +QD E + D LET R +IWR+E LG E Q
Sbjct: 486 KRREIQDVEELSAD-LETFSYRAMQEIWREEQLGKENIQ 523
>AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein.
Length = 731
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 383 QQRHLQDTEHRTRDVLETGRERG--QIWRQEDLGIE*FQ 273
++R +QD E + D LET R +IWR+E LG E Q
Sbjct: 486 KRREIQDVEELSAD-LETFSYRAMQEIWREEQLGKENIQ 523
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = -3
Query: 594 GPPRTSSKITSRANS-NSYSTKRELNSSATITTKLSNWMLTLTGTKTA*PGEMENT---T 427
G P +S K TSR S ++ ST N S + T S+ + + T T+++ P E T T
Sbjct: 614 GDPSSSKKYTSRRTSTDAESTTNHQNPSES-TLAASSGVSSTTVTQSSIPTEKSTTVDYT 672
Query: 426 PATESAGDSSLFGKTTTSSSR 364
T S S T SS +
Sbjct: 673 ATTVSTKSHSTITVTEPSSKK 693
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,327
Number of Sequences: 27780
Number of extensions: 390305
Number of successful extensions: 1328
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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