Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_N06
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 372 e-104
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 371 e-104
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 162 4e-41
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 98 1e-21
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.11
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.18
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 30 0.32
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.98
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.3
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 4.0
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.2
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.2
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 6.9
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.2
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 372 bits (916), Expect = e-104
Identities = 167/210 (79%), Positives = 189/210 (90%)
Frame = -3
Query: 759 LIGQIVSSITASLRFDGALNVNLTEFQTNLVPYPRIHFLLVTYAPVISAEKAYHEQLSVA 580
LI Q+VSSITASLRF G+LNV+L EFQTNLVPYPRIHF LVTY+P++SA KA+HE SV
Sbjct: 234 LIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQ 293
Query: 579 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 400
EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPT
Sbjct: 294 EITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPT 353
Query: 399 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 220
GFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYV
Sbjct: 354 GFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYV 413
Query: 219 GEGMEEGEFSEAREDLAALEKDYEEVGMDS 130
GEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 414 GEGMEEGEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 371 bits (912), Expect = e-104
Identities = 167/210 (79%), Positives = 188/210 (89%)
Frame = -3
Query: 759 LIGQIVSSITASLRFDGALNVNLTEFQTNLVPYPRIHFLLVTYAPVISAEKAYHEQLSVA 580
LI Q+VSSITASLRF+G+LNV+L EFQTNLVPYPRIHF LVTYAP++SA KA+HE SV
Sbjct: 230 LIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQ 289
Query: 579 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 400
EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPT
Sbjct: 290 EITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPT 349
Query: 399 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 220
GFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYV
Sbjct: 350 GFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYV 409
Query: 219 GEGMEEGEFSEAREDLAALEKDYEEVGMDS 130
GEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 410 GEGMEEGEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 162 bits (394), Expect = 4e-41
Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Frame = -3
Query: 759 LIGQIVSSITASLRFDGALNVNLTEFQTNLVPYPRIHFLLVTYAPVISAEKAYHEQLSVA 580
L+ +++ +T S RF G LN +L + N+VP+PR+HF +V +AP+ + + + +SV
Sbjct: 228 LVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVP 287
Query: 579 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT 400
E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P
Sbjct: 288 ELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPD 347
Query: 399 GFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 220
+ PP DL + + + N+T+I E + RL +F M+ ++AF+HWY
Sbjct: 348 NVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYT 399
Query: 219 GEGMEEGEFSEAR---EDLAALEKDYEEVGMD 133
GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 97.9 bits (233), Expect = 1e-21
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 7/216 (3%)
Frame = -3
Query: 774 HQPXCLIGQIVSSITASLRFDGALNVNLTEFQTNLVPYPRIHFLLVTYAPVIS---AEKA 604
HQ L+ ++S+ T +LR+ G +N +L +L+P PR HFLL +Y P + E
Sbjct: 226 HQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAK 285
Query: 603 YHEQLSVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 427
+ +V ++ P NQMV +P + +++ + +G+ P DV+ ++ I+ +R
Sbjct: 286 AIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRY 345
Query: 426 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 247
F+ W P +V ++ + P + ++ + ML+N T+IA + R ++D +
Sbjct: 346 ASFIPWGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRK 400
Query: 246 KRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYE 148
+ AF+ Y E + E EF +R+ +A L +YE
Sbjct: 401 RNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.9 bits (69), Expect = 0.11
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = -1
Query: 695 TSPSSRLTWCLTPVSTSYWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPV 522
TS S L+ + +++ T S+ P PT+ S +P + T+ ++ + +TPV
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Query: 521 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 366
++ CT TS P T + S P +N +T S TS P
Sbjct: 441 TSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 29.9 bits (64), Expect = 0.43
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -1
Query: 695 TSPSSRLTWCLTPVSTSYWSRTRQSSLPRRPTMNSFPS-PRSQTHASSPPTRW*NATPVM 519
TS T C T S Y S SS + S P + T+ ++ + +TPV
Sbjct: 487 TSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVT 546
Query: 518 ASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 372
++ CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 547 STPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 27.9 bits (59), Expect = 1.7
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = -1
Query: 692 SPSSRLTWCLTPVSTSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 513
+P+ T TP++T+ + T +S+P T + +P + T+ ++ + +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTT--NCTTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTST 466
Query: 512 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 372
CT TS P T + S P +N +T S TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 25.4 bits (53), Expect = 9.2
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -1
Query: 662 TPVSTSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 483
TP++T+ + T +S+P T + +P + T+ ++ + +TPV +S + T V
Sbjct: 466 TPLTTT--NCTTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPV 522
Query: 482 TSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 372
TS P T + + SVL S+ P++ + TTS
Sbjct: 523 TSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.18
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -1
Query: 620 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 441
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 440 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 354
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 25.4 bits (53), Expect = 9.2
Identities = 23/90 (25%), Positives = 31/90 (34%)
Frame = -1
Query: 620 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 441
S+P+RP + P S P P + +A S P+ P P
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615
Query: 440 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 351
PSV + V P + SV P PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 30.3 bits (65), Expect = 0.32
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 662 TPVSTSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 552
T V+TSY++ + +S P T++S +P S T S+P
Sbjct: 1457 TVVTTSYYTTSVYTSAPATETVSSTEAPESSTVTSNP 1493
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 0.98
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -1
Query: 653 STSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 474
STS + T SS RP +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 473 PRM*TRPSLPSKPSVLSNSST 411
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 576 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 451
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 448 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 591
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 284 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 111
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 110 EPKSTK 93
EP+ TK
Sbjct: 208 EPRFTK 213
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -1
Query: 692 SPSSRLTWCLTPVSTSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 552
SPS LT L S+++ S + + + R+ T +S SP+ Q+ S+P
Sbjct: 619 SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 689 PSSRLTWCLTPVSTSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 543
P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 665 LTPVSTSYWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 513
LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 626 QSSLPRRPTMNSFPSPRSQTHASSPPTR 543
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 452 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 366
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 471 WVRRHHGTAYSKPCTCHDGG 530
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 455 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 360
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,063,716
Number of Sequences: 5004
Number of extensions: 66913
Number of successful extensions: 257
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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