Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N03
         (781 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...    68   1e-11
07_03_0571 - 19602755-19603831                                         41   0.001

>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 31/41 (75%), Positives = 39/41 (95%)
 Frame = -1

Query: 658 DNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 536
           D++S+NAGEM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct: 327 DSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 367


>07_03_0571 - 19602755-19603831
          Length = 358

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = -1

Query: 655 NASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 539
           +A+ NA E+   L++ +NR RQA IT E++EI++GA AL
Sbjct: 319 SATDNAIELRKNLSMVYNRQRQAKITGEILEIVAGADAL 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,628,825
Number of Sequences: 37544
Number of extensions: 271008
Number of successful extensions: 639
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)