Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N03
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.34 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.34 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   7.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   7.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 391 FIESCHRKTCLLFFIENVFKTFIIETSDH 305
           F+ SC +   +L+FI    +T++I  S +
Sbjct: 272 FVGSCRKTDQILYFIRGCLQTYLINASTY 300


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 391 FIESCHRKTCLLFFIENVFKTFIIETSDH 305
           F+ SC +   +L+FI    +T++I  S +
Sbjct: 310 FVGSCRKTDQILYFIRGCLQTYLINASTY 338


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 116 SLVSRECCRDGSCPVSAS 169
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 116 SLVSRECCRDGSCPVSAS 169
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 527 GGLVQGGRTRDDLDELPGDDS 589
           GG+ Q G+ +++ D+   D+S
Sbjct: 73  GGIQQAGKPKEETDDKDDDES 93


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 676 VPHDRHDNASKNAGEMIDKLTLTFNRTRQAV 584
           +PH+   NA+   GE++       +RT   V
Sbjct: 176 IPHNIAVNATTGMGELVSLAVQAIDRTNTMV 206


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 410 WVKIFFLYFL 439
           WVK+ FLY+L
Sbjct: 331 WVKVVFLYWL 340


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 221 GWVAVVPCYFR*YPHQLLITKVNEQSDLMV 310
           GW    P  ++  PH + +  V E  ++ V
Sbjct: 502 GWGEYTPVVYKKTPHAMGLDYVGEDDNMQV 531


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 694 RLXRAVVPHDRHDNASKNAGEMI 626
           +L + V+PHD   NAS   G ++
Sbjct: 168 QLKQVVMPHDIAVNASTGNGGLV 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,347
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 69
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)