Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_N02
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...    44   1e-04
03_01_0034 + 318432-318825,318902-319851                               44   1e-04
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...    44   1e-04
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349     44   1e-04
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379     43   2e-04
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998     43   2e-04
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...    43   2e-04
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467           43   2e-04
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516...    29   4.1  
08_02_1491 + 27500532-27500972                                         28   7.1  

>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLVSEYQQ
Sbjct: 572 KAFLHWYTGEGM-DEMEFTEAESNMNDLVSEYQQ 604


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLVSEYQQ
Sbjct: 392 KAFLHWYTGEGM-DEMEFTEAESNMNDLVSEYQQ 424


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLVSEYQQ
Sbjct: 413 KAFLHWYTGEGM-DEMEFTEAESNMNDLVSEYQQ 445


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLVSEYQQ
Sbjct: 392 KAFLHWYTGEGM-DEMEFTEAESNMNDLVSEYQQ 424


>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLV+EYQQ
Sbjct: 392 KAFLHWYTGEGM-DEMEFTEAESNMNDLVAEYQQ 424


>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLV+EYQQ
Sbjct: 392 KAFLHWYTGEGM-DEMEFTEAESNMNDLVAEYQQ 424


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLV+EYQQ
Sbjct: 408 KAFLHWYTSEGM-DEMEFTEAESNMNDLVAEYQQ 440


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = -1

Query: 699 QAFLXWYTXRGAWTRWSSXEAESNMNDLVSEYQQ 598
           +AFL WYT  G        EAESNMNDLV+EYQQ
Sbjct: 392 KAFLHWYTGEGM-DEMEFTEAESNMNDLVAEYQQ 424


>08_02_1050 +
           23949828-23949981,23950083-23950534,23951599-23951631,
           23952069-23952179,23953175-23953348
          Length = 307

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 539 SPAPAPRQTLRPRRRWPP 592
           SP+P+P  +  P RRWPP
Sbjct: 27  SPSPSPLLSRAPSRRWPP 44


>08_02_1491 + 27500532-27500972
          Length = 146

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 533 LESPAPAPR-QTLRPRRRWPPGYCW 604
           + +PA APR    RPRR W    CW
Sbjct: 122 MAAPAAAPRWYGRRPRRTWETDQCW 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,449,852
Number of Sequences: 37544
Number of extensions: 288191
Number of successful extensions: 685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)