Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_M24
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   2.7  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   6.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   6.2  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 42  NFVYTPIKFIQEVAIIYKNNSS*VN 116
           NFV +  +F+  +A  Y NNS   N
Sbjct: 5   NFVMSSYQFVNSIASCYPNNSQNTN 29


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 599 LMPLYKNGLATVKQPVFVSDVAQGIVNAARDDD 501
           L+ L KN     KQ V+V DVAQG+ +   D D
Sbjct: 75  LITLNKNPQKN-KQFVYVEDVAQGVDSGLLDLD 106


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 222 LDAHGRPGSVGTETFSRPSVLHGSAWRVPETRPS 121
           + A+GR  S+   +F  PS++  + WRV +  PS
Sbjct: 171 IGANGR-NSIVDVSFCSPSLVGDNNWRVCDETPS 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,812
Number of Sequences: 2352
Number of extensions: 18654
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)