Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_M18
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 117 2e-27
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 103 2e-23
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 99 4e-22
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 95 1e-20
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 95 1e-20
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 89 9e-19
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 75 1e-14
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 3e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 39 7e-04
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 26 5.4
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 117 bits (281), Expect = 2e-27
Identities = 54/108 (50%), Positives = 73/108 (67%)
Frame = -1
Query: 375 KGFMVQXXXXXXXXXXGESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLA 196
K FM+Q GESIW +F DE +LKHDRP+T+SMAN+GP+TNGSQFFIT
Sbjct: 501 KNFMIQGGDPLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTD 560
Query: 195 PTPWLDNKHTVFGRVTRGMEVVQNIGAAKTNPKTDKPYDDIRILSLSV 52
TPWLD KHT+F R G++VV I +T+ K D+P + +I+++S+
Sbjct: 561 LTPWLDGKHTIFARAYAGLDVVHRIEQGETD-KYDRPLEPTKIINISI 607
Score = 66.5 bits (155), Expect = 4e-12
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = -3
Query: 616 TSKARTTXRDIFNEKPSKEDIISATEGQGVQRIYEQAVIHTTLGDIHVRIFGKDVPKTAE 437
++K + RD++NE+ + G + + A+IHTT GDI ++++ ++ PK +
Sbjct: 421 STKFTLSDRDVYNEQVLPVTNNEGRQENGNILLGKAAIIHTTQGDISIKLYPEEAPKAVQ 480
Query: 436 NFCVHARNGYYNGHIFHRV 380
NF HA NGYY+ IFHR+
Sbjct: 481 NFTTHAENGYYDNTIFHRI 499
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2
Query: 686 DPTLFCTAYKKNRFYLFSKRS 624
DPTLF TA+KK RFYLFS S
Sbjct: 401 DPTLFATAWKKQRFYLFSNMS 421
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 103 bits (248), Expect = 2e-23
Identities = 49/102 (48%), Positives = 67/102 (65%)
Frame = -1
Query: 369 FMVQXXXXXXXXXXGESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPT 190
F++Q G SI+G +F DE + L H LSMANAGP+TN SQFFITLAPT
Sbjct: 50 FVIQGGDPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPT 109
Query: 189 PWLDNKHTVFGRVTRGMEVVQNIGAAKTNPKTDKPYDDIRIL 64
PWLD KHT+FGRV G+ V + +G +T+ +D+P + ++I+
Sbjct: 110 PWLDGKHTIFGRVVSGLSVCKRMGLIRTD-SSDRPIEPLKII 150
Score = 47.2 bits (107), Expect = 3e-06
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -3
Query: 502 IHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRV 380
+ T+LG I + ++ + PKT +NF A+ GYY+G IFHRV
Sbjct: 6 LQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRV 46
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 99 bits (238), Expect = 4e-22
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = -1
Query: 324 ESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTR 145
+SI+G F DE L H RP LSMANAGPD+NGSQFFIT TPWLD H VFG V
Sbjct: 99 KSIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLS 157
Query: 144 GMEVVQNIGAAKTNPKTDKPYDDIRIL 64
G ++V+ I A+T+ + DKP +D++I+
Sbjct: 158 GYDIVKKISKAETDNR-DKPLEDVKII 183
Score = 41.1 bits (92), Expect = 2e-04
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = -3
Query: 490 LGDIHVRIFGKDVPKTAENFCVHA--RNGY-YNGHIFHRV 380
LG + + +FGK VPKTAENF A G+ Y G IFHRV
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 95.1 bits (226), Expect = 1e-20
Identities = 45/74 (60%), Positives = 56/74 (75%)
Frame = -1
Query: 324 ESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTR 145
+SI+G +F DE A LKH++P LSMANAGP+TNGSQFFIT TPWLD KH VFG VT
Sbjct: 74 KSIYGEKFPDENFA-LKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTE 132
Query: 144 GMEVVQNIGAAKTN 103
GM+VV+ + + +N
Sbjct: 133 GMDVVKKVESLGSN 146
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 94.7 bits (225), Expect = 1e-20
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = -1
Query: 324 ESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTR 145
ESI+G +F DE LKHD+P+ LSMANAGP+TNGSQFFIT PTP LD KH VFG+V +
Sbjct: 79 ESIYGEKFEDE-NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQ 137
Query: 144 GMEVVQNIGAAKTNPKTDKP 85
G V+ I +T K D P
Sbjct: 138 GKSTVRTIENLET--KNDDP 155
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 88.6 bits (210), Expect = 9e-19
Identities = 47/101 (46%), Positives = 57/101 (56%)
Frame = -1
Query: 369 FMVQXXXXXXXXXXGESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPT 190
FM+Q G+SIWG F DEF LKHD +SMAN G +TNGSQFFI P
Sbjct: 324 FMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPA 383
Query: 189 PWLDNKHTVFGRVTRGMEVVQNIGAAKTNPKTDKPYDDIRI 67
LDNKHT+FGRV G+ V+ + TN D P I++
Sbjct: 384 KHLDNKHTIFGRVVGGLNVLDALEKVPTN-SNDHPKLPIKL 423
Score = 33.1 bits (72), Expect = 0.047
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 508 AVIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHR 383
A I T G+I++ + P NF A+ GYY IFHR
Sbjct: 278 ARIVTNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHR 319
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 74.9 bits (176), Expect = 1e-14
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 303 FADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPTPWLDNKHTVFGRVTRGMEVVQN 124
F DE LKHDRP LSMANAG D+NG QFFIT P +LD KH VFG V G ++V+
Sbjct: 91 FPDE-NFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKE 149
Query: 123 IGAAKTNPKTDKPYDDIRIL 64
I + + +P ++ I+
Sbjct: 150 IESTPVGANS-RPKSNVAIV 168
Score = 33.9 bits (74), Expect = 0.027
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Frame = -3
Query: 490 LGDIHVRIFGKDVPKTAEN---FCVHARNGY------YNGHIFHRVXQG 371
LG I +R+F VPKTAEN FC G Y FHR+ QG
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQG 66
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 53.6 bits (123), Expect = 3e-08
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = -1
Query: 369 FMVQXXXXXXXXXXGESIWGGEFADEFRAHLKHDRPYTLSMANAGPDTNGSQFFITLAPT 190
F++Q GESI+G FA E L+ R + MA + N SQFFITL PT
Sbjct: 61 FLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPT 120
Query: 189 PWLDNKHTVFGRV 151
P + K T+FGRV
Sbjct: 121 PEWNGKQTLFGRV 133
Score = 45.6 bits (103), Expect = 8e-06
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = -3
Query: 505 VIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRV 380
++ TT GDI + ++ K+VPK NF GYY+G I HRV
Sbjct: 16 ILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRV 57
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 39.1 bits (87), Expect = 7e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 505 VIHTTLGDIHVRIFGKDVPKTAENFCVHARNGYYNGHIFHRV 380
+I TT+GD+ + +F K+ PKT ENF + YYN F+ +
Sbjct: 4 LIETTVGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNI 45
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 574 KPSKEDIISATEGQGVQRIYEQAVIHTTLGDIHVR 470
KP D S++ G ++ YE+ + T+ G IHVR
Sbjct: 776 KPDMFDTTSSSGGSQLESAYEETKVPTSYG-IHVR 809
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,033,467
Number of Sequences: 5004
Number of extensions: 34265
Number of successful extensions: 126
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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