Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_M17
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-26|CAB60561.1|  874|Caenorhabditis elegans Hypothetical...    28   6.6  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   6.6  

>AL132862-26|CAB60561.1|  874|Caenorhabditis elegans Hypothetical
           protein Y73F8A.33 protein.
          Length = 874

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 561 MQTSVRRQGGTLWPAATCGLIL 626
           +  SV R GG  W   TCGL L
Sbjct: 44  LSRSVDRNGGVAWECTTCGLTL 65


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 560 NANVSPSTGRHTVARSNMRFDTLRRTHPAVALQRPRTFSRHPSESR 697
           N N + ST   T+        +  RT P     RPR+ S   SESR
Sbjct: 181 NQNSTESTNPSTIIDLKAILQSTGRTSPQTTTSRPRSRSPRSSESR 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,329,203
Number of Sequences: 27780
Number of extensions: 317917
Number of successful extensions: 774
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)