Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_M14
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0850 - 6472213-6473541,6474229-6474282,6474616-6474671,647...    30   1.8  
11_04_0048 + 12792270-12792276,12793453-12793697,12793866-12794741     30   2.4  
02_03_0196 + 16246729-16246859,16247133-16247304                       29   4.2  
08_01_0333 + 2977397-2977648,2978416-2978784,2980108-2980169,298...    28   7.4  

>06_01_0850 -
           6472213-6473541,6474229-6474282,6474616-6474671,
           6474824-6476012
          Length = 875

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = -3

Query: 521 NLSTNLPIFIPVYNKLNIVVFKLNKNTRLLKRARNTTNQQHRPPRVSFLLASSV*IEHLT 342
           +L+TNL  ++PV+  L+ ++  L KN+ LL    +   +    P ++FL    +    + 
Sbjct: 630 SLATNLAFWLPVFGSLDSILRALRKNSSLLSANLDKVVK----PNLAFLKQCGIDARDVA 685

Query: 341 ATPILSTKR 315
           + P L + R
Sbjct: 686 SNPNLYSSR 694


>11_04_0048 + 12792270-12792276,12793453-12793697,12793866-12794741
          Length = 375

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -2

Query: 675 SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSLN 544
           S  NK TT++ N  IS   S K+ H+++ ++ +     L + +N
Sbjct: 169 SILNKMTTEMENPQISQETSEKVIHSVESNVIKTNGTELCSKVN 212


>02_03_0196 + 16246729-16246859,16247133-16247304
          Length = 100

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +1

Query: 484 YTGINIGRLVLRLRLIPGAGVQAGIEVVVGIAAEAGLDIVAELGTVVEADISV 642
           Y GI IG     + +  G G+  GI + +GI    G+D+  ++   V+ D+ V
Sbjct: 45  YIGIGIG-----IGIGIGIGIGIGIGIGIGIGIGIGIDVDVDVDVDVDVDVDV 92


>08_01_0333 +
           2977397-2977648,2978416-2978784,2980108-2980169,
           2980271-2980418
          Length = 276

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 553 GIEVVVGIAAEAGLDIVAELGTVVEADISVVELRSSLVRIA 675
           G E +VG+AA AGL +VA + +VV    S +    SL   A
Sbjct: 111 GAETLVGVAASAGLAVVAVVLSVVHISGSHLNPAVSLAMAA 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,262,516
Number of Sequences: 37544
Number of extensions: 294972
Number of successful extensions: 750
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)